RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 BDP1A6H8Y1 2624 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 MYO7AQ13402 2215 aa23.23■■□□□ 1.31
TOP3A-219ENST00000584887 IPO5O00410 1097 aaKnown RBP23.22■■□□□ 1.31
TOP3A-219ENST00000584887 ENPP3O14638 875 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 PRPF3O43395 683 aaKnown RBP23.22■■□□□ 1.31
TOP3A-219ENST00000584887 PKN1Q16512 942 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 TIGD5Q53EQ6 642 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 MIS18BP1Q6P0N0 1132 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 PDXDC2PQ6P474 469 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 MTHFD1LQ6UB35 978 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 RASGRP4Q8TDF6 673 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 ZNF577Q9BSK1 485 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 ZMYND12Q9H0C1 365 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 ZNF302Q9NR11 478 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 GINS2Q9Y248 185 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 ADGRA3Q8IWK6 1321 aa23.22■■□□□ 1.31
TOP3A-219ENST00000584887 H3BNC9 293 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 ATG7O95352 703 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 KCNA5P22460 613 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 SLC26A2P50443 739 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 CCT2P78371 535 aaKnown RBP23.21■■□□□ 1.31
TOP3A-219ENST00000584887 PAK2Q13177 524 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 ABHD15Q6UXT9 468 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 EP400NLQ6ZTU2 488 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 TRMT1LQ7Z2T5 733 aaKnown RBP23.21■■□□□ 1.31
TOP3A-219ENST00000584887 CCDC60Q8IWA6 550 aaPredicted RBP23.21■■□□□ 1.31
TOP3A-219ENST00000584887 CKAP2LQ8IYA6 745 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 ATP8B4Q8TF62 1192 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 NCOA5Q9HCD5 579 aaKnown RBP23.21■■□□□ 1.31
TOP3A-219ENST00000584887 NLRC5Q86WI3 1866 aa23.21■■□□□ 1.31
TOP3A-219ENST00000584887 COL4A6Q14031 1691 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 NID2Q14112 1375 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 IGLV3-22A0A075B6J6 115 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 HBP1O60381 514 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 CSPG5O95196 566 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 CYP3A4P08684 503 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 KLRC1P26715 233 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 GNA11P29992 359 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 SETQ01105 290 aaPredicted RBP23.2■■□□□ 1.3
TOP3A-219ENST00000584887 KRT76Q01546 638 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 BTG3Q14201 252 aaPredicted RBP23.2■■□□□ 1.3
TOP3A-219ENST00000584887 PRR16Q569H4 304 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 MCTP2Q6DN12 878 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 SWSAP1Q6NVH7 229 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 LINC01599Q8WXQ3 324 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 CELF4Q9BZC1 486 aaKnown RBP23.2■■□□□ 1.3
TOP3A-219ENST00000584887 TTC3P53804 2025 aa23.2■■□□□ 1.3
TOP3A-219ENST00000584887 IGKV6D-21A0A0A0MT36 114 aa23.19■■□□□ 1.3
TOP3A-219ENST00000584887 SMIM35A0A1B0GVV1 85 aa23.19■■□□□ 1.3
TOP3A-219ENST00000584887 TMEM266Q2M3C6 531 aa23.19■■□□□ 1.3
TOP3A-219ENST00000584887 BANK1Q8NDB2 785 aa23.19■■□□□ 1.3
TOP3A-219ENST00000584887 CCDC148Q8NFR7 591 aa23.19■■□□□ 1.3
TOP3A-219ENST00000584887 VPS54Q9P1Q0 977 aa23.19■■□□□ 1.3
TOP3A-219ENST00000584887 PADI3Q9ULW8 664 aa23.19■■□□□ 1.3
TOP3A-219ENST00000584887 IGSF9BQ9UPX0 1349 aa23.18■■□□□ 1.3
TOP3A-219ENST00000584887 DHX15O43143 795 aaKnown RBP23.18■■□□□ 1.3
TOP3A-219ENST00000584887 TCEAL5Q5H9L2 206 aa23.18■■□□□ 1.3
TOP3A-219ENST00000584887 BICD2Q8TD16 824 aa23.18■■□□□ 1.3
TOP3A-219ENST00000584887 CRYGNQ8WXF5 182 aa23.18■■□□□ 1.3
TOP3A-219ENST00000584887 PPP1R16BQ96T49 567 aa23.18■■□□□ 1.3
TOP3A-219ENST00000584887 C11orf84Q9BUA3 381 aaPredicted RBP23.18■■□□□ 1.3
TOP3A-219ENST00000584887 FTHL17Q9BXU8 183 aa23.18■■□□□ 1.3
TOP3A-219ENST00000584887 RNF26Q9BY78 433 aaPredicted RBP23.18■■□□□ 1.3
TOP3A-219ENST00000584887 SQORQ9Y6N5 450 aa23.18■■□□□ 1.3
TOP3A-219ENST00000584887 RALGAPA2Q2PPJ7 1873 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 PDIA3P30101 505 aaKnown RBP23.17■■□□□ 1.3
TOP3A-219ENST00000584887 BMPR1AP36894 532 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 NFX1Q12986 1120 aaKnown RBP23.17■■□□□ 1.3
TOP3A-219ENST00000584887 PAN2Q504Q3 1202 aaKnown RBP23.17■■□□□ 1.3
TOP3A-219ENST00000584887 NME8Q8N427 588 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 AGXT2Q9BYV1 514 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 NSUN3Q9H649 340 aaKnown RBP23.17■■□□□ 1.3
TOP3A-219ENST00000584887 TBC1D22BQ9NU19 505 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 RWDD3Q9Y3V2 267 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 SAMM50Q9Y512 469 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 LOXHD1Q8IVV2 1947 aa23.17■■□□□ 1.3
TOP3A-219ENST00000584887 COL1A2P08123 1366 aa23.16■■□□□ 1.3
TOP3A-219ENST00000584887 IFNAR1P17181 557 aa23.16■■□□□ 1.3
TOP3A-219ENST00000584887 NTRK3Q16288 839 aa23.16■■□□□ 1.3
TOP3A-219ENST00000584887 ZNF484Q5JVG2 852 aa23.16■■□□□ 1.3
TOP3A-219ENST00000584887 ZNF746Q6NUN9 644 aaPredicted RBP23.16■■□□□ 1.3
TOP3A-219ENST00000584887 RTN4RL1Q86UN2 441 aaPredicted RBP23.16■■□□□ 1.3
TOP3A-219ENST00000584887 NPAS4Q8IUM7 802 aa23.16■■□□□ 1.3
TOP3A-219ENST00000584887 FBXL16Q8N461 479 aa23.16■■□□□ 1.3
TOP3A-219ENST00000584887 RC3H2Q9HBD1 1191 aaKnown RBP23.16■■□□□ 1.3
TOP3A-219ENST00000584887 LRFN2Q9ULH4 789 aa23.16■■□□□ 1.3
TOP3A-219ENST00000584887 KDM3AQ9Y4C1 1321 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.15■■□□□ 1.3
TOP3A-219ENST00000584887 DGKIO75912 1065 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 RB1P06400 928 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 PSAPP07602 524 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 STAG3L1P0CL83 205 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 COL9A1P20849 921 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 NLRP5P59047 1200 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 LEXMQ3ZCV2 418 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 RUFY3Q7L099 469 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 TRIM22Q8IYM9 498 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 KIAA0319LQ8IZA0 1049 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 METTL13Q8N6R0 699 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 LARP6Q9BRS8 491 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms