RNA–Protein interactions for RNA: ENST00000583972.1

SUPT6H-209, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 1,969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-209ENST00000583972 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 LACRTQ9GZZ8 138 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 DDX25Q9UHL0 483 aaKnown RBP13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 RCCD1A6NED2 376 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 ZBTB5O15062 677 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 NKRFO15226 690 aaKnown RBP eCLIP13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 GDF11O95390 407 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 HMGCS2P54868 508 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 PRMT2P55345 433 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 PRKCZQ05513 592 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 CKAP4Q07065 602 aaKnown RBP13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 SPA17Q15506 151 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 CLEC10AQ8IUN9 316 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 SMCR8Q8TEV9 937 aaPredicted RBP13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 TFR2Q9UP52 801 aa13.58□□□□□ -0.24
SUPT6H-209ENST00000583972 HLA-DOAP06340 250 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 IDEP14735 1019 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 MCM3P25205 808 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 FCGRTP55899 365 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 KIF5AQ12840 1032 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 HAS1Q92839 578 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 TSG101Q99816 390 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 GLT8D2Q9H1C3 349 aa13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
SUPT6H-209ENST00000583972 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 LCA5LO95447 670 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 USP14P54578 494 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 MTMR2Q13614 643 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 UBE2SQ16763 222 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 HYIQ5T013 277 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 KCNK18Q7Z418 384 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 ANKRD13CQ8N6S4 541 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 RAET1EQ8TD07 263 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 SECISBP2LQ93073 1101 aaKnown RBP13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 MMS19Q96T76 1030 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 EDEM3Q9BZQ6 932 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 PSTPIP2Q9H939 334 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 GABRQQ9UN88 632 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 H3BQF6 201 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 ZNF263O14978 683 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 SLC26A4O43511 780 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 USO1O60763 962 aaKnown RBP13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 ASNSP08243 561 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 CYP27A1Q02318 531 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 MTFR1Q15390 333 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 ECM1Q16610 540 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 MYOCDQ8IZQ8 938 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 EHD4Q9H223 541 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 AS3MTQ9HBK9 375 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 PNMA3Q9UL41 463 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 DOCK3Q8IZD9 2030 aa13.56□□□□□ -0.24
SUPT6H-209ENST00000583972 TARSL2A2RTX5 802 aaKnown RBP13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 MARCH6O60337 910 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 HOXD10P28358 340 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 GRK4P32298 578 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 COASYQ13057 564 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 TRIM58Q8NG06 486 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 FAM207AQ9NSI2 230 aaPredicted RBP13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 ARHGAP20Q9P2F6 1191 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 PCDHA12Q9UN75 941 aa13.55□□□□□ -0.24
SUPT6H-209ENST00000583972 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 EPHB6O15197 1021 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 SRGAP2O75044 1071 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 PLEKP08567 350 aaPredicted RBP13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 SLC16A2P36021 539 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 FKBP3Q00688 224 aaKnown RBP13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 CASP8Q14790 479 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 FAM110CQ1W6H9 321 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 ZCWPW2Q504Y3 356 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 KCTD1Q719H9 257 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 WDR18Q9BV38 432 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 IFIH1Q9BYX4 1025 aaKnown RBP13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 MMRN2Q9H8L6 949 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 JRKLQ9Y4A0 524 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 PCDHA13Q9Y5I0 950 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 DUSP10Q9Y6W6 482 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 MACROD2A1Z1Q3 448 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 ERICH4A6NGS2 130 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 TNPO2O14787 897 aaKnown RBP13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 TACC1O75410 805 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 USP11P51784 963 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 KIF11P52732 1056 aa13.54□□□□□ -0.24
SUPT6H-209ENST00000583972 FAM26FQ5R3K3 315 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms