RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 KARSQ15046 597 aaKnown RBP13.04□□□□□ -0.32
CDRT1-207ENST00000583965 KCNA10Q16322 511 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 UGCGQ16739 394 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 TMEM119Q4V9L6 283 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 POTEBQ6S5H4 581 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 NACC1Q96RE7 527 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 MTG1Q9BT17 334 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-207ENST00000583965 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 TUT1Q9H6E5 874 aaKnown RBP13.04□□□□□ -0.32
CDRT1-207ENST00000583965 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
CDRT1-207ENST00000583965 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 A0A1B0GVL5 298 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 DNM1LO00429 736 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 ZNF862O60290 1169 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 GADD45BO75293 160 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-207ENST00000583965 OATP04181 439 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 ASGR1P07306 291 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 PLCG1P19174 1290 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 SYKP43405 635 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 GJA8P48165 433 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-207ENST00000583965 PRKCEQ02156 737 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 ECM1Q16610 540 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 SKOR2Q2VWA4 1001 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-207ENST00000583965 XKR3Q5GH77 459 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 RRAGBQ5VZM2 374 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 OTUD6AQ7L8S5 288 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 TRIM50Q86XT4 487 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 CKAP2LQ8IYA6 745 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 ATP8B4Q8TF62 1192 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 U2AF1L4Q8WU68 220 aaKnown RBP13.03□□□□□ -0.32
CDRT1-207ENST00000583965 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-207ENST00000583965 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 ANKEF1Q9NU02 776 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 WRAP73Q9P2S5 460 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-207ENST00000583965 DBR1Q9UK59 544 aaKnown RBP13.03□□□□□ -0.32
CDRT1-207ENST00000583965 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 DNM3Q9UQ16 869 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
CDRT1-207ENST00000583965 HAS3O00219 553 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
CDRT1-207ENST00000583965 HBP1O60381 514 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.33
CDRT1-207ENST00000583965 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
CDRT1-207ENST00000583965 ATP4AP20648 1035 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 YWHABP31946 246 aaKnown RBP13.02□□□□□ -0.33
CDRT1-207ENST00000583965 STAT6P42226 847 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 PSEN2P49810 448 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 NDUFA8P51970 172 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 ACLYP53396 1101 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 MFSD10Q14728 455 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 PLCB4Q15147 1175 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 ZRSR1Q15695 479 aaKnown RBP13.02□□□□□ -0.33
CDRT1-207ENST00000583965 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
CDRT1-207ENST00000583965 PDILTQ8N807 584 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 KAT2BQ92831 832 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 NIFKQ9BYG3 293 aaKnown RBP13.02□□□□□ -0.33
CDRT1-207ENST00000583965 SEZ6LQ9BYH1 1024 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 GOLPH3LQ9H4A5 285 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 PHF24Q9UPV7 400 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 COL1A2P08123 1366 aa13.02□□□□□ -0.33
CDRT1-207ENST00000583965 A0A087X0B3 334 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 STBD1O95210 358 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 EYA4O95677 639 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 MBD3O95983 291 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 MARK3P27448 753 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 E2F4Q16254 413 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 KIAA0753Q2KHM9 967 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 EXOC8Q8IYI6 725 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 ENGASEQ8NFI3 743 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 LARP4BQ92615 738 aaKnown RBP13.01□□□□□ -0.33
CDRT1-207ENST00000583965 RAD54LQ92698 747 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 CCDC34Q96HJ3 373 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 GLT1D1Q96MS3 346 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 CCDC43Q96MW1 224 aaKnown RBP13.01□□□□□ -0.33
CDRT1-207ENST00000583965 PANK2Q9BZ23 570 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 RNPEPQ9H4A4 650 aa13.01□□□□□ -0.33
CDRT1-207ENST00000583965 ZNF202O95125 648 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 SLFN14P0C7P3 912 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 RARRES1P49788 294 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 PSMC6P62333 389 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 SNW1Q13573 536 aaKnown RBP13□□□□□ -0.33
CDRT1-207ENST00000583965 NAALADL2Q58DX5 795 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 KANK3Q6NY19 840 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 ANO5Q75V66 913 aa13□□□□□ -0.33
CDRT1-207ENST00000583965 KCNK18Q7Z418 384 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms