RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PLCB4Q15147 1175 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 IER5Q5VY09 327 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 NFXL1Q6ZNB6 911 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 SMRP1Q8NCR6 262 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 POF1BQ8WVV4 589 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 FTHL17Q9BXU8 183 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 SLC9A2Q9UBY0 812 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 BARX2Q9UMQ3 279 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-221ENST00000583080 PCDHA6Q9UN73 950 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 PCDHA8Q9Y5H6 950 aa18.51■□□□□ 0.55
SREBF1-221ENST00000583080 RRN3P2A6NIE6 340 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 GNAQP50148 359 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 TMEM266Q2M3C6 531 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 RBM23Q86U06 439 aaKnown RBP18.5■□□□□ 0.55
SREBF1-221ENST00000583080 CCDC82Q8N4S0 544 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 EFHBQ8N7U6 833 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 CYP2W1Q8TAV3 490 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 PGBD1Q96JS3 809 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 MFSD14AQ96MC6 490 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 PHOX2BQ99453 314 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 KCNH7Q9NS40 1196 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 PCDHA2Q9Y5H9 948 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 SQORQ9Y6N5 450 aa18.5■□□□□ 0.55
SREBF1-221ENST00000583080 CCDC69A6NI79 296 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 M0QZ92 97 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 ACTR2P61160 394 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 RBM10P98175 930 aaKnown RBP18.49■□□□□ 0.55
SREBF1-221ENST00000583080 NAALADL2Q58DX5 795 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 TMTC3Q6ZXV5 915 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 HEATR3Q7Z4Q2 680 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 PRSS33Q8NF86 280 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 EDAQ92838 391 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 PPP2R3CQ969Q6 453 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
SREBF1-221ENST00000583080 AZI2Q9H6S1 392 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 HCSTQ9UBK5 93 aa18.49■□□□□ 0.55
SREBF1-221ENST00000583080 MGEA5O60502 916 aa18.48■□□□□ 0.55
SREBF1-221ENST00000583080 RPLP2P05387 115 aaKnown RBP18.48■□□□□ 0.55
SREBF1-221ENST00000583080 STAG3L1P0CL83 205 aa18.48■□□□□ 0.55
SREBF1-221ENST00000583080 COASYQ13057 564 aa18.48■□□□□ 0.55
SREBF1-221ENST00000583080 ITGB3BPQ13352 177 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-221ENST00000583080 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
SREBF1-221ENST00000583080 MXRA8Q9BRK3 442 aa18.48■□□□□ 0.55
SREBF1-221ENST00000583080 MTA3Q9BTC8 594 aa18.48■□□□□ 0.55
SREBF1-221ENST00000583080 LRRC2Q9BYS8 371 aa18.48■□□□□ 0.55
SREBF1-221ENST00000583080 USP15Q9Y4E8 981 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-221ENST00000583080 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-221ENST00000583080 KDM3AQ9Y4C1 1321 aa18.48■□□□□ 0.55
SREBF1-221ENST00000583080 TMEM221A6NGB7 291 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 LOC730098B7Z3J9 87 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 M0R296 226 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 MAFGO15525 162 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 ARP10275 920 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 MCM5P33992 734 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 WWC2Q6AWC2 1192 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 TYW1BQ6NUM6 668 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 MTHFD1LQ6UB35 978 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 VN1R2Q8NFZ6 395 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 TMEM87BQ96K49 555 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 LRFN2Q9ULH4 789 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 NFASCO94856 1347 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 CNTNAP5Q8WYK1 1306 aa18.47■□□□□ 0.55
SREBF1-221ENST00000583080 KMT2EQ8IZD2 1858 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 SMIM35A0A1B0GVV1 85 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 SARSP49591 514 aaKnown RBP18.46■□□□□ 0.55
SREBF1-221ENST00000583080 STAT5BP51692 787 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 KRT76Q01546 638 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
SREBF1-221ENST00000583080 IER5LQ5T953 404 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 TRIM67Q6ZTA4 783 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 PLPPR4Q7Z2D5 763 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 MICU3Q86XE3 530 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 TMEM40Q8WWA1 233 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 SDF4Q9BRK5 362 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 CDHR5Q9HBB8 845 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 ERVK-5Q9HDB9 667 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 GINS2Q9Y248 185 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 ZDBF2Q9HCK1 2354 aa18.46■□□□□ 0.55
SREBF1-221ENST00000583080 PER2O15055 1255 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 CCNE2O96020 404 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 CALM1P0DP23 149 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 CALM2P0DP24 149 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 CALM3P0DP25 149 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 LIFRP42702 1097 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 CBX2Q14781 532 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-221ENST00000583080 FANCBQ8NB91 859 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 PPP1R16BQ96T49 567 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 LSG1Q9H089 658 aaKnown RBP18.45■□□□□ 0.54
SREBF1-221ENST00000583080 TLE6Q9H808 572 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 AGO4Q9HCK5 861 aaKnown RBP18.45■□□□□ 0.54
SREBF1-221ENST00000583080 NOC2LQ9Y3T9 749 aaKnown RBP18.45■□□□□ 0.54
SREBF1-221ENST00000583080 SLC12A7Q9Y666 1083 aa18.45■□□□□ 0.54
SREBF1-221ENST00000583080 TBKBP1A7MCY6 615 aa18.44■□□□□ 0.54
SREBF1-221ENST00000583080 DDX39AO00148 427 aaKnown RBP18.44■□□□□ 0.54
SREBF1-221ENST00000583080 SLC27A2O14975 620 aa18.44■□□□□ 0.54
SREBF1-221ENST00000583080 ZXDAP98168 799 aa18.44■□□□□ 0.54
SREBF1-221ENST00000583080 CEP55Q53EZ4 464 aa18.44■□□□□ 0.54
SREBF1-221ENST00000583080 FAM102BQ5T8I3 360 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms