RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 HSP90B1P14625 803 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 IL13P35225 146 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 STRN3Q13033 797 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 TMEM177Q53S58 311 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 TMC5Q6UXY8 1006 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 C16orf59Q7L2K0 433 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 OSTM1Q86WC4 334 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 TRIM48Q8IWZ4 208 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 TMEM209Q96SK2 561 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 CELF4Q9BZC1 486 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 CBLCQ9ULV8 474 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 ATP8A1Q9Y2Q0 1164 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 NUB1Q9Y5A7 615 aa6.55□□□□□ -1.36
SMCHD1-205ENST00000581383 LAMTOR5O43504 91 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 FBXO21O94952 628 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 NPTXRO95502 500 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 PDE6AP16499 860 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 SCNN1BP51168 640 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 ADAM17P78536 824 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 SPIRE1Q08AE8 756 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 CRY1Q16526 586 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 CR1LQ2VPA4 569 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 CPZQ66K79 652 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 TEPPQ6URK8 271 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 ARHGEF18Q6ZSZ5 1173 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 OVCH1Q7RTY7 1134 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 Q8N1Y9 231 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 NXPE1Q8N323 547 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 CISD2Q8N5K1 135 aaKnown RBP6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 PHOSPHO1Q8TCT1 267 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 SAMD11Q96NU1 681 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 SMOC1Q9H4F8 434 aa6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
SMCHD1-205ENST00000581383 TCRBV5S2A0A599 114 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 CBX4O00257 560 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 TRAF5O00463 557 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 HMGB1P09429 215 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 KRT15P19012 456 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 GRIN1Q05586 938 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 VASNQ6EMK4 673 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 LIMS2Q7Z4I7 341 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 DDX42Q86XP3 938 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 AFAP1L2Q8N4X5 818 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 ATL2Q8NHH9 583 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 PIP4K2CQ8TBX8 421 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 DEF6Q9H4E7 631 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 CABP5Q9NP86 173 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 ST6GALNAC2Q9UJ37 374 aa6.53□□□□□ -1.36
SMCHD1-205ENST00000581383 ZNF891A8MT65 544 aaPredicted RBP6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 NKRFO15226 690 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 B4GALT4O60513 344 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 JAM2P57087 298 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 EVA1CP58658 441 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 ADAM9Q13443 819 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 SART3Q15020 963 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 ARHGAP36Q6ZRI8 547 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 OTOP3Q7RTS5 596 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 C2orf69Q8N8R5 385 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 OR2W6PQ8NHA6 318 aa6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMCHD1-205ENST00000581383 TCRBV5S4A2TA0A5A2 114 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 PTPDC1A2A3K4 754 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 KCNK3O14649 394 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 SLC27A2O14975 620 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 F2P00734 622 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 AMY2AP04746 511 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 AMY2BP19961 511 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 CDK11BP21127 795 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 CDKN1CP49918 316 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 MECP2P51608 486 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 LACTBP83111 547 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 DHCR24Q15392 516 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 GPR19Q15760 415 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 EP400NLQ6ZTU2 488 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 PTRH1Q86Y79 214 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 KIF18BQ86Y91 864 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 PRPF38AQ8NAV1 312 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 CHST14Q8NCH0 376 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 ORAI3Q9BRQ5 295 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 SMURF1Q9HCE7 757 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 MCM8Q9UJA3 840 aa6.51□□□□□ -1.37
SMCHD1-205ENST00000581383 ZNF561-AS1K7EIQ3 104 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 GAS7O60861 476 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 TADA3O75528 432 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 EYA4O95677 639 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 CPEP16870 476 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 ZNF28P17035 718 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 EMC4Q5J8M3 183 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 CIR1Q86X95 450 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 RBM12BQ8IXT5 1001 aaKnown RBP6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 KBTBD2Q8IY47 623 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 TTC9BQ8N6N2 239 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 DVL3Q92997 716 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 USP7Q93009 1102 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 RBM15Q96T37 977 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 SLC6A20Q9NP91 592 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms