RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 SWSAP1Q6NVH7 229 aa24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 CCDC60Q8IWA6 550 aaPredicted RBP24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 TRIM22Q8IYM9 498 aa24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 ASB2Q96Q27 587 aa24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 TSPYL2Q9H2G4 693 aaPredicted RBP24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 TBC1D22BQ9NU19 505 aa24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 PDRG1Q9NUG6 133 aa24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 PCDHA2Q9Y5H9 948 aa24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 EVPLQ92817 2033 aa24.18■■□□□ 1.46
CSNK1D-216ENST00000581108 EDIL3O43854 480 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 SLC26A2P50443 739 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 NLRP5P59047 1200 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 MRPS5P82675 430 aaKnown RBP24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 TMEM62Q0P6H9 643 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 FAM160B1Q5W0V3 765 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 MIS18BP1Q6P0N0 1132 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 SP7Q8TDD2 431 aaPredicted RBP24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 C17orf80Q9BSJ5 609 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 ZNF302Q9NR11 478 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 SH3GLB2Q9NR46 395 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 WDR81Q562E7 1941 aa24.17■■□□□ 1.46
CSNK1D-216ENST00000581108 XIRP2A4UGR9 3374 aa24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 CPLX1O14810 134 aa24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 CIITAP33076 1130 aa24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 SETQ01105 290 aaPredicted RBP24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 IER5Q5VY09 327 aa24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 PDXDC2PQ6P474 469 aa24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 MTHFD1LQ6UB35 978 aa24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 YME1L1Q96TA2 773 aa24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 AGO3Q9H9G7 860 aaKnown RBP24.16■■□□□ 1.46
CSNK1D-216ENST00000581108 ENPP3O14638 875 aa24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 HBP1O60381 514 aa24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 RPLP2P05387 115 aaKnown RBP24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 ATP4AP20648 1035 aa24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 KLRC1P26715 233 aa24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 TSHZ1Q6ZSZ6 1077 aa24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 ATP8B4Q8TF62 1192 aa24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 LENG9Q96B70 501 aa24.15■■□□□ 1.46
CSNK1D-216ENST00000581108 SMIM35A0A1B0GVV1 85 aa24.14■■□□□ 1.45
CSNK1D-216ENST00000581108 CD52P31358 61 aa24.14■■□□□ 1.45
CSNK1D-216ENST00000581108 TFF2Q03403 129 aa24.14■■□□□ 1.45
CSNK1D-216ENST00000581108 ZNF746Q6NUN9 644 aaPredicted RBP24.14■■□□□ 1.45
CSNK1D-216ENST00000581108 NLRC5Q86WI3 1866 aa24.14■■□□□ 1.45
CSNK1D-216ENST00000581108 AIFM3Q96NN9 605 aa24.14■■□□□ 1.45
CSNK1D-216ENST00000581108 TCF20Q9UGU0 1960 aaKnown RBP24.14■■□□□ 1.45
CSNK1D-216ENST00000581108 TTC3P53804 2025 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 DEXIO95424 95 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 USP11P51784 963 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 ERICH6BQ5W0A0 696 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 FBXO22Q8NEZ5 403 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 CELF4Q9BZC1 486 aaKnown RBP24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 LMCD1Q9NZU5 365 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 PCDHA4Q9UN74 947 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 MAFBQ9Y5Q3 323 aaPredicted RBP24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 TRPV2Q9Y5S1 764 aa24.13■■□□□ 1.45
CSNK1D-216ENST00000581108 ZBTB42B2RXF5 422 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 M0QZ92 97 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 MSH4O15457 936 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 KRT76Q01546 638 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 CPLX2Q6PUV4 134 aaKnown RBP24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 TRMT1LQ7Z2T5 733 aaKnown RBP24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 CKAP2LQ8IYA6 745 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 SMAP1Q8IYB5 467 aaPredicted RBP24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 NME8Q8N427 588 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 TBCKQ8TEA7 893 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 PCDHA10Q9Y5I2 948 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 SQORQ9Y6N5 450 aa24.12■■□□□ 1.45
CSNK1D-216ENST00000581108 PSAPP07602 524 aa24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 EPC2Q52LR7 807 aa24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 ZNF484Q5JVG2 852 aa24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 RTN4RL1Q86UN2 441 aaPredicted RBP24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 IL17RAQ96F46 866 aa24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 TCEAL9Q9UHQ7 104 aa24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 SAMM50Q9Y512 469 aa24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 COL1A2P08123 1366 aa24.11■■□□□ 1.45
CSNK1D-216ENST00000581108 BRWD1Q9NSI6 2320 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 NCOR1O75376 2440 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 SCRN1Q12765 414 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 KIAA0319LQ8IZA0 1049 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 BLIDQ8IZY5 108 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 BBXQ8WY36 941 aaPredicted RBP24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 GJA10Q969M2 543 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 GABBR1Q9UBS5 961 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 PADI3Q9ULW8 664 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 IGSF9BQ9UPX0 1349 aa24.1■■□□□ 1.45
CSNK1D-216ENST00000581108 M0R2N6 131 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 DTNBO60941 627 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 NPY5RQ15761 445 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 TMEM192Q8IY95 271 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 ADAMTS19Q8TE59 1207 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 LINC01599Q8WXQ3 324 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 SAMD11Q96NU1 681 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 CDHR5Q9HBB8 845 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 TPCN1Q9ULQ1 816 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 MUC3AQ02505 3323 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 RALGAPA2Q2PPJ7 1873 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 KDM3AQ9Y4C1 1321 aa24.09■■□□□ 1.45
CSNK1D-216ENST00000581108 COL4A6Q14031 1691 aa24.08■■□□□ 1.45
CSNK1D-216ENST00000581108 BMP1P13497 986 aa24.08■■□□□ 1.45
CSNK1D-216ENST00000581108 KCNQ1P51787 676 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms