RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 FSD2A1L4K1 749 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 PER2O15055 1255 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 GLP2RO95838 553 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 CYP21A2P08686 494 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 ATF7P17544 494 aaPredicted RBP11.39□□□□□ -0.59
RFFL-208ENST00000581039 SMARCA1P28370 1054 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 KIF5BP33176 963 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 UBE3AQ05086 875 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
RFFL-208ENST00000581039 NME8Q8N427 588 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
RFFL-208ENST00000581039 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 SPZ1Q9BXG8 430 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 IL25Q9H293 177 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
RFFL-208ENST00000581039 PCDHA2Q9Y5H9 948 aa11.39□□□□□ -0.59
RFFL-208ENST00000581039 IGSF9BQ9UPX0 1349 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 SPDYE3A6NKU9 549 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 E7EWF7 191 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 GFRA3O60609 400 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 SRGAP2BP0DMP2 458 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 AVPR2P30518 371 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 SARSP49591 514 aaKnown RBP11.38□□□□□ -0.59
RFFL-208ENST00000581039 GNAQP50148 359 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 GATMP50440 423 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 KRT76Q01546 638 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 FAM43BQ6ZT52 329 aaPredicted RBP11.38□□□□□ -0.59
RFFL-208ENST00000581039 IGDCC4Q8TDY8 1250 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 ATP8B4Q8TF62 1192 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 RUFY2Q8WXA3 655 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 CDCA3Q99618 268 aaPredicted RBP11.38□□□□□ -0.59
RFFL-208ENST00000581039 JPH1Q9HDC5 661 aaPredicted RBP11.38□□□□□ -0.59
RFFL-208ENST00000581039 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 TLR9Q9NR96 1032 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 SLC9A2Q9UBY0 812 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 PCDHGC5Q9Y5F6 944 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 UBIAD1Q9Y5Z9 338 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 ZDBF2Q9HCK1 2354 aa11.38□□□□□ -0.59
RFFL-208ENST00000581039 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 FGF18O76093 207 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 IGHDP01880 384 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 STAT5BP51692 787 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 VCPP55072 806 aaKnown RBP11.37□□□□□ -0.59
RFFL-208ENST00000581039 RBM10P98175 930 aaKnown RBP11.37□□□□□ -0.59
RFFL-208ENST00000581039 PLCB4Q15147 1175 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 DUSP6Q16828 381 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 TMEM266Q2M3C6 531 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 PDE12Q6L8Q7 609 aaKnown RBP11.37□□□□□ -0.59
RFFL-208ENST00000581039 PLPPR4Q7Z2D5 763 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 THNSL1Q8IYQ7 743 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 ZNF654Q8IZM8 581 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 TRAPPC12Q8WVT3 735 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 SUSD6Q92537 303 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 PCYT2Q99447 389 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 SDF4Q9BRK5 362 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 MYL10Q9BUA6 226 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 TMX1Q9H3N1 280 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 FAM86C1Q9NVL1 165 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 TMEM260Q9NX78 707 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 GINS2Q9Y248 185 aa11.37□□□□□ -0.59
RFFL-208ENST00000581039 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 ZFHX2Q9C0A1 2572 aaPredicted RBP11.36□□□□□ -0.59
RFFL-208ENST00000581039 DOCK5Q9H7D0 1870 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 SMIM35A0A1B0GVV1 85 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 DENND3A2RUS2 1198 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 RPS6KA5O75582 802 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 DDAH1O94760 285 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 ERVFC1P60507 584 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 PTH1RQ03431 593 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 UBE2SQ16763 222 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 PTPN21Q16825 1174 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 ODR4Q5SWX8 454 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 MTHFD1LQ6UB35 978 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 NFXL1Q6ZNB6 911 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 SLC24A5Q71RS6 500 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 VN1R2Q8NFZ6 395 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 ASIC4Q96FT7 647 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 ADAM2Q99965 735 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 RGS18Q9NS28 235 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 KCNH7Q9NS40 1196 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 C1orf112Q9NSG2 853 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
RFFL-208ENST00000581039 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
RFFL-208ENST00000581039 PCDHA6Q9UN73 950 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 PCDHA8Q9Y5H6 950 aa11.36□□□□□ -0.59
RFFL-208ENST00000581039 ATG2AQ2TAZ0 1938 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 GPR182O15218 404 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 KLRC1P26715 233 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 TECP42680 631 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 NUBP1P53384 320 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 ANTXR2P58335 489 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 ACTR2P61160 394 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 ANKRD54Q6NXT1 300 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 CASC1Q6TDU7 716 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 TMEM184AQ6ZMB5 413 aa11.35□□□□□ -0.59
RFFL-208ENST00000581039 CMTR1Q8N1G2 835 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms