RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 CDHR1Q96JP9 859 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 FGD4Q96M96 766 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MAGEC2Q9UBF1 373 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PDHXO00330 501 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 FAM13AO94988 1023 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 RARRES1P49788 294 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GTF2A2P52657 109 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 WDR78Q5VTH9 848 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SMCR8Q8TEV9 937 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SH2D3AQ9BRG2 576 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PORCNQ9H237 461 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 JPH1Q9HDC5 661 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 COL4A3BPQ9Y5P4 624 aa16.43■□□□□ 0.22
CDK5RAP3-218ENST00000580391 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 LYPLA2O95372 231 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 COPB2P35606 906 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SP2Q02086 613 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SEPT14Q6ZU15 432 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 EPM2AIP1Q7L775 607 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 FAM114A1Q8IWE2 563 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 RDM1Q8NG50 284 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TSG101Q99816 390 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SENP7Q9BQF6 1050 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SLC9A2Q9UBY0 812 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GAP43P17677 238 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 YWHABP31946 246 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ICAM3P32942 547 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PSMC5P62195 406 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MAPK7Q13164 816 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CST9Q5W186 159 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CEP135Q66GS9 1140 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PADI6Q6TGC4 694 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TRMT1LQ7Z2T5 733 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MMP19Q99542 508 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MRPL44Q9H9J2 332 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 OLFML3Q9NRN5 406 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 KCND2Q9NZV8 630 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 DBR1Q9UK59 544 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PCDHA10Q9Y5I2 948 aa16.42■□□□□ 0.22
CDK5RAP3-218ENST00000580391 LGALS16A8MUM7 142 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 HIP1RO75146 1068 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PRPF6O94906 941 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SKILP12757 684 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ZNF131P52739 623 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 KCTD2Q14681 263 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 UTP14CQ5TAP6 766 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 FOXR2Q6PJQ5 311 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SMAP1Q8IYB5 467 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 DAW1Q8N136 415 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TUBGCP2Q9BSJ2 902 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PARVGQ9HBI0 331 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ODF2LQ9ULJ1 636 aa16.41■□□□□ 0.22
CDK5RAP3-218ENST00000580391 DNAJC25-GNG10A0A024R161 153 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PES1O00541 588 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 BACH1O14867 736 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 USO1O60763 962 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GCNT3O95395 438 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 UBA1P22314 1058 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 NMT1P30419 496 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 HOXD13P35453 343 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MTIF2P46199 727 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ACTR2P61160 394 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 EEPD1Q7L9B9 569 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CCDC60Q8IWA6 550 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MYCT1Q8N699 235 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ANKRD13CQ8N6S4 541 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 FIZ1Q96SL8 496 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MROH8Q9H579 483 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GABBR1Q9UBS5 961 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SLC45A1Q9Y2W3 748 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ITIH6Q6UXX5 1313 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 B4DLN1 442 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ZNF862O60290 1169 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 KIF20AO95235 890 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ITGBL1O95965 494 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ZBTB48P10074 688 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 UBXN1Q04323 297 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MAEAQ7L5Y9 396 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TC2NQ8N9U0 490 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SHCBP1Q8NEM2 672 aa16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GTF3C2Q8WUA4 911 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CCDC43Q96MW1 224 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ADKP55263 362 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NPEPPSP55786 919 aa16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 KCNA1Q09470 495 aa16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 BMT2Q1RMZ1 405 aa16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 MIIPQ5JXC2 388 aa16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ZNF507Q8TCN5 953 aa16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 ZMYM2Q9UBW7 1377 aa16.39■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PSAPP07602 524 aa16.38■□□□□ 0.21
CDK5RAP3-218ENST00000580391 HUNKP57058 714 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms