RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 MAEAQ7L5Y9 396 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 FBXO16Q8IX29 292 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SMC1BQ8NDV3 1235 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DNAJC19Q96DA6 116 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PARK7Q99497 189 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DESI2Q9BSY9 194 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 POLR3CQ9BUI4 534 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RUSC1Q9BVN2 902 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DNAI1Q9UI46 699 aa14.07□□□□□ -0.16
CDK5RAP3-217ENST00000580287 HTTP42858 3142 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 A0A0G2JMZ2 1700 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TRIM49BA6NDI0 452 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ARIH2O95376 493 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PMS1P54277 932 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 AMPD3Q01432 767 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PAK1Q13153 545 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 EPHA7Q15375 998 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ERCC6LQ2NKX8 1250 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 NELFBQ8WX92 580 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GPRASP2Q96D09 838 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PDGFCQ9NRA1 345 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 A0A0U1RQJ8 604 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SLC10A3P09131 477 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MTF1Q14872 753 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 FILIP1LQ4L180 1135 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ZNF658Q5TYW1 1059 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ATRIPQ8WXE1 791 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 IWS1Q96ST2 819 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TBC1D22BQ9NU19 505 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 EXOC1Q9NV70 894 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CGNQ9P2M7 1197 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ADD3Q9UEY8 706 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SLC45A1Q9Y2W3 748 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DNAH12Q6ZR08 3092 aa14.06□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RHOBTB3O94955 611 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 EDNRBP24530 442 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 XRRA1Q6P2D8 792 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ZNF771Q7L3S4 317 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GPR142Q7Z601 462 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 IFNL1Q8IU54 200 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 KIAA0895Q8NCT3 520 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DDX41Q9UJV9 622 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 LCTP09848 1927 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TMEM88BA6NKF7 163 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PES1O00541 588 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 KRT18P05783 430 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GCLCP48506 637 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CCNA1P78396 465 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 HTRA3P83110 453 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 NR1I3Q14994 352 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CT47A1Q5JQC4 288 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GJC2Q5T442 439 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TOGARAM2Q6ZUX3 1019 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SYT2Q8N9I0 419 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 BAG1Q99933 345 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 VPS16Q9H269 839 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 EPC1Q9H2F5 836 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MAGEF1Q9HAY2 307 aa14.05□□□□□ -0.16
CDK5RAP3-217ENST00000580287 A0A1B0GTH6 734 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MANSC4A6NHS7 340 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 AOC2O75106 756 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GNPTABQ3T906 1256 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SWSAP1Q6NVH7 229 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 COPS5Q92905 334 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ZBTB9Q96C00 473 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 REEP2Q9BRK0 252 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 JPH1Q9HDC5 661 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MORF4L1Q9UBU8 362 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TCEAL9Q9UHQ7 104 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 N4BP3O15049 544 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TOMM70O94826 608 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 UBA1P22314 1058 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 NPEPPSP55786 919 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GABPB1Q06547 395 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PLA2G4FQ68DD2 849 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RINT1Q6NUQ1 792 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 FBXO38Q6PIJ6 1188 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PPFIBP1Q86W92 1011 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TMEM139Q8IV31 216 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GIMAP8Q8ND71 665 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CTAGE1Q96RT6 745 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 IRX2Q9BZI1 471 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TUFT1Q9NNX1 390 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GABBR1Q9UBS5 961 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RWDD2AQ9UIY3 292 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 IVNS1ABPQ9Y6Y0 642 aa14.04□□□□□ -0.16
CDK5RAP3-217ENST00000580287 P4HBP07237 508 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ACTR2P61160 394 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 GIT2Q14161 759 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 KCNB1Q14721 858 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 UNC13DQ70J99 1090 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CNPY4Q8N129 248 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 SHCBP1Q8NEM2 672 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ANKRD20A12PQ8NF67 263 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TAB2Q9NYJ8 693 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms