RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PTPN21Q16825 1174 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 MARCH8Q5T0T0 291 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 RTN4RL1Q86UN2 441 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 NME8Q8N427 588 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 ATP8B4Q8TF62 1192 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 LINC01599Q8WXQ3 324 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 LNPKQ9C0E8 428 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 AZI2Q9H6S1 392 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 TLR9Q9NR96 1032 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 PADI3Q9ULW8 664 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 TRPV2Q9Y5S1 764 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 KIAA1671Q9BY89 1806 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 DMXL1Q9Y485 3027 aa14.03□□□□□ -0.16
CDK5RAP3-216ENST00000579853 EPG5Q9HCE0 2579 aa14.02□□□□□ -0.16
CDK5RAP3-216ENST00000579853 IGSF9BQ9UPX0 1349 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 KDM3AQ9Y4C1 1321 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 GSTTP1A0A1W2PQM5 241 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PROB1E7EW31 1015 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 IFIT3O14879 490 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 KCNA2P16389 499 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 MARK3P27448 753 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 TROAPQ12815 778 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SLC35G1Q2M3R5 365 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PAN2Q504Q3 1202 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 ODR4Q5SWX8 454 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SPOUT1Q5T280 376 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 ZBTB33Q86T24 672 aa14.02□□□□□ -0.17
CDK5RAP3-216ENST00000579853 MEIS2O14770 477 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PPFIA3O75145 1194 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 INSRRP14616 1297 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 HOXB8P17481 243 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SARSP49591 514 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 VCPP55072 806 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 IGBP1P78318 339 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 WTAPQ15007 396 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 DUSP6Q16828 381 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 USP17L6PQ6QN14 398 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 TMEM184AQ6ZMB5 413 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 CYB5R4Q7L1T6 521 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 CATIPQ7Z7H3 387 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 RASGRP4Q8TDF6 673 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 RRP36Q96EU6 259 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 CELF4Q9BZC1 486 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 FAM49AQ9H0Q0 323 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 FAM86C1Q9NVL1 165 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SEC63Q9UGP8 760 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 NR2E1Q9Y466 385 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 TELO2Q9Y4R8 837 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PCDHB7Q9Y5E2 793 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PCDHA2Q9Y5H9 948 aa14.01□□□□□ -0.17
CDK5RAP3-216ENST00000579853 MYO10Q9HD67 2058 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 LOXHD1Q8IVV2 1947 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PLXNA4Q9HCM2 1894 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 GALR2O43603 387 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 ATP9AO75110 1047 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 KIF5BP33176 963 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 MTMR1Q13613 665 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 AAMPQ13685 434 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 RALYLQ86SE5 291 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PLEKHM2Q8IWE5 1019 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 UBALD2Q8IYN6 164 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 RIPOR3Q96MK2 946 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 MAP3K14Q99558 947 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 LZTS2Q9BRK4 669 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SPZ1Q9BXG8 430 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 C1orf112Q9NSG2 853 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PUF60Q9UHX1 559 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 TRPC6Q9Y210 931 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 LZTS1Q9Y250 596 aa14□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SMIM35A0A1B0GVV1 85 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 H0Y858 1186 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PER2O15055 1255 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 FGF18O76093 207 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 KRT76Q01546 638 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PLPPR4Q7Z2D5 763 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 THNSL1Q8IYQ7 743 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 CTCFLQ8NI51 663 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 JPH1Q9HDC5 661 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 NGRNQ9NPE2 291 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 TMEM260Q9NX78 707 aa13.99□□□□□ -0.17
CDK5RAP3-216ENST00000579853 FNDC1Q4ZHG4 1894 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 DENND3A2RUS2 1198 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SPDYE3A6NKU9 549 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 TBKBP1A7MCY6 615 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 ITGB5P18084 799 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 LAG3P18627 525 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SLC26A2P50443 739 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 TMEM62Q0P6H9 643 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 NFX1Q12986 1120 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 MTMR3Q13615 1198 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 ANKRD54Q6NXT1 300 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SLC24A5Q71RS6 500 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 CHD1LQ86WJ1 897 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PIBF1Q8WXW3 757 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 NECTIN4Q96NY8 510 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 S1PR5Q9H228 398 aa13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 RWDD1Q9H446 243 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-216ENST00000579853 PSTPIP2Q9H939 334 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms