RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 ZNF302Q9NR11 478 aa15.58■□□□□ 0.08
GGA3-208ENST00000579743 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.08
GGA3-208ENST00000579743 FAM50BQ9Y247 325 aa15.58■□□□□ 0.08
GGA3-208ENST00000579743 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
GGA3-208ENST00000579743 ENPP3O14638 875 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 EPB41L2O43491 1005 aaKnown RBP15.57■□□□□ 0.08
GGA3-208ENST00000579743 NEFLP07196 543 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 RPS6KB1P23443 525 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 CTNNB1P35222 781 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 KRT76Q01546 638 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 BTG3Q14201 252 aaPredicted RBP15.57■□□□□ 0.08
GGA3-208ENST00000579743 ZNF484Q5JVG2 852 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 CPLX2Q6PUV4 134 aaKnown RBP15.57■□□□□ 0.08
GGA3-208ENST00000579743 SMAP1Q8IYB5 467 aaPredicted RBP15.57■□□□□ 0.08
GGA3-208ENST00000579743 BANK1Q8NDB2 785 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 ATP8B4Q8TF62 1192 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 PCYT2Q99447 389 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 RNF26Q9BY78 433 aaPredicted RBP15.57■□□□□ 0.08
GGA3-208ENST00000579743 CELF4Q9BZC1 486 aaKnown RBP15.57■□□□□ 0.08
GGA3-208ENST00000579743 C22orf23Q9BZE7 217 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 LMAN2LQ9H0V9 348 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 LRFN2Q9ULH4 789 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 COL1A2P08123 1366 aa15.57■□□□□ 0.08
GGA3-208ENST00000579743 CPLX1O14810 134 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 PSAPP07602 524 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 KLRC1P26715 233 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 CD52P31358 61 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 ITGB3BPQ13352 177 aaPredicted RBP15.56■□□□□ 0.08
GGA3-208ENST00000579743 ZNF746Q6NUN9 644 aaPredicted RBP15.56■□□□□ 0.08
GGA3-208ENST00000579743 MTHFD1LQ6UB35 978 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 ABHD15Q6UXT9 468 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 PPP2R3CQ969Q6 453 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 PLVAPQ9BX97 442 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 CEP131Q9UPN4 1083 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 SAMM50Q9Y512 469 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 ADGRA3Q8IWK6 1321 aa15.56■□□□□ 0.08
GGA3-208ENST00000579743 COL4A4P53420 1690 aaPredicted RBP15.56■□□□□ 0.08
GGA3-208ENST00000579743 COL4A6Q14031 1691 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 KDM3AQ9Y4C1 1321 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 IGKV6D-21A0A0A0MT36 114 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 CPA1P15085 419 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 KCNA5P22460 613 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 BMPR1AP36894 532 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 PRR16Q569H4 304 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 SWSAP1Q6NVH7 229 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 EP400NLQ6ZTU2 488 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 ZNF710Q8N1W2 664 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
GGA3-208ENST00000579743 FAM167AQ96KS9 214 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 SLC26A6Q9BXS9 759 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 OSBPL7Q9BZF2 842 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 NSUN3Q9H649 340 aaKnown RBP15.55■□□□□ 0.08
GGA3-208ENST00000579743 SH3GLB2Q9NR46 395 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 PADI3Q9ULW8 664 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 PCDHA10Q9Y5I2 948 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 CYP46A1Q9Y6A2 500 aa15.55■□□□□ 0.08
GGA3-208ENST00000579743 NID2Q14112 1375 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 IGSF9BQ9UPX0 1349 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.54■□□□□ 0.08
GGA3-208ENST00000579743 FAM86B1E9PN63 330 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 C5orf67F2Z3F1 127 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 GPR182O15218 404 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 DGKIO75912 1065 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 FAM86B2P0C5J1 330 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 IFNAR1P17181 557 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 NLRP5P59047 1200 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 TMEM62Q0P6H9 643 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 NFX1Q12986 1120 aaKnown RBP15.54■□□□□ 0.08
GGA3-208ENST00000579743 LEXMQ3ZCV2 418 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 NAALADL2Q58DX5 795 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 TRAPPC12Q8WVT3 735 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 NECAB3Q96P71 396 aaPredicted RBP15.54■□□□□ 0.08
GGA3-208ENST00000579743 GINS2Q9Y248 185 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 PCDHB7Q9Y5E2 793 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 CHD9Q3L8U1 2897 aa15.54■□□□□ 0.08
GGA3-208ENST00000579743 TCF20Q9UGU0 1960 aaKnown RBP15.54■□□□□ 0.08
GGA3-208ENST00000579743 DENND3A2RUS2 1198 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 MAGEB2O15479 319 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 RPS6KA5O75582 802 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 CCNE2O96020 404 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 TMOD1P28289 359 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 USP11P51784 963 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 SSRP1Q08945 709 aaKnown RBP15.53■□□□□ 0.08
GGA3-208ENST00000579743 RUFY3Q7L099 469 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 CMTR2Q8IYT2 770 aaKnown RBP15.53■□□□□ 0.08
GGA3-208ENST00000579743 METTL13Q8N6R0 699 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 PHKBQ93100 1093 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 AGXT2Q9BYV1 514 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 AGO3Q9H9G7 860 aaKnown RBP15.53■□□□□ 0.08
GGA3-208ENST00000579743 C1orf112Q9NSG2 853 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 NRBP2Q9NSY0 501 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 NCOR1O75376 2440 aa15.53■□□□□ 0.08
GGA3-208ENST00000579743 EYSQ5T1H1 3165 aa15.52■□□□□ 0.08
GGA3-208ENST00000579743 IGLV3-22A0A075B6J6 115 aa15.52■□□□□ 0.08
GGA3-208ENST00000579743 WDR64B1ANS9 1081 aa15.52■□□□□ 0.08
GGA3-208ENST00000579743 PDIA3P30101 505 aaKnown RBP15.52■□□□□ 0.08
GGA3-208ENST00000579743 CIITAP33076 1130 aa15.52■□□□□ 0.08
GGA3-208ENST00000579743 CCT2P78371 535 aaKnown RBP15.52■□□□□ 0.08
GGA3-208ENST00000579743 PKN1Q16512 942 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms