RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 H0YC42 278 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 TIPRLO75663 272 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 STMN1P16949 149 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 ITIH2P19823 946 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 BTF3P20290 206 aaKnown RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 GARTP22102 1010 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 RBM5P52756 815 aaKnown RBP eCLIP7.35□□□□□ -1.23
COPS3-216ENST00000579716 GJA9P57773 515 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 RING1Q06587 406 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 ZNF252P-AS1Q0IIN9 211 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 ACAP1Q15027 740 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 TNNI3KQ59H18 835 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 C10orf76Q5T2E6 689 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 LCE5AQ5TCM9 118 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 TRIM68Q6AZZ1 485 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 FASTKD5Q7L8L6 764 aaKnown RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 SRLQ86TD4 932 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 ZSWIM9Q86XI8 627 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 SLC44A2Q8IWA5 706 aaPredicted RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 TEX11Q8IYF3 940 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 RNF214Q8ND24 703 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 BHLHE22Q8NFJ8 381 aaPredicted RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 LILRB1Q8NHL6 650 aaPredicted RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 RASSF8Q8NHQ8 419 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 FNIP1Q8TF40 1166 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 CCT6BQ92526 530 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 RHOBTB2Q9BYZ6 727 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 SLC13A1Q9BZW2 595 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 UNC45AQ9H3U1 944 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 FANCFQ9NPI8 374 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 C19orf73Q9NVV2 129 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 ZHX1Q9UKY1 873 aaPredicted RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 DMTF1Q9Y222 760 aa7.35□□□□□ -1.23
COPS3-216ENST00000579716 LRRFIP2Q9Y608 721 aaKnown RBP7.35□□□□□ -1.23
COPS3-216ENST00000579716 A0A1B0GVC2 190 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 LINC00854A0A1B0GVQ3 168 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 ABHD14A-ACY1A0A1B0GW23 586 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 CCDC66A2RUB6 948 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 M0QX08 132 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 PLOD2O00469 737 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 APAF1O14727 1248 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 PDPK1O15530 556 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 TADA3O75528 432 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 PGRP06401 933 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 HARSP12081 509 aaKnown RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 ZSCAN20P17040 1043 aaPredicted RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 USP8P40818 1118 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 LIMK1P53667 647 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 ERVK-24P63145 666 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 NSUN2Q08J23 767 aaKnown RBP eCLIP7.34□□□□□ -1.23
COPS3-216ENST00000579716 ANKRD1Q15327 319 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 PDCD2Q16342 344 aaPredicted RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 MLANAQ16655 118 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 CCDC152Q4G0S7 254 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 ANGEL2Q5VTE6 544 aaKnown RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 CRTC1Q6UUV9 634 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 FAM186BQ8IYM0 893 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 RTKN2Q8IZC4 609 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 FAM26EQ8N5C1 309 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 C7orf31Q8N865 590 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 DRAXINQ8NBI3 349 aaPredicted RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 HDAC2Q92769 488 aaKnown RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 UTP14AQ9BVJ6 771 aaKnown RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 KCNQ5Q9NR82 932 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 POGKQ9P215 609 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 PRKAG3Q9UGI9 489 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 PHTF1Q9UMS5 762 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 MRPL11Q9Y3B7 192 aaKnown RBP7.34□□□□□ -1.23
COPS3-216ENST00000579716 PCDHGB3Q9Y5G1 929 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 SLC30A1Q9Y6M5 507 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 SLC4A7Q9Y6M7 1214 aa7.34□□□□□ -1.23
COPS3-216ENST00000579716 GOLGA6L10A0A0M3HER8 536 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 RASA4BC9J798 803 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 EOMESO95936 686 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 MTHFD1P11586 935 aaKnown RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 ARNTP27540 789 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 MXI1P50539 228 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 RCAN1P53805 252 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 EVCP57679 992 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 ITKQ08881 620 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 G3BP1Q13283 466 aaKnown RBP eCLIP7.33□□□□□ -1.24
COPS3-216ENST00000579716 TCIRG1Q13488 830 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 RASGRF1Q13972 1273 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 CCNG2Q16589 344 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 ZSCAN26Q16670 478 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 RABL6Q3YEC7 729 aaPredicted RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 MINDY4Q4G0A6 757 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 BTNL9Q6UXG8 535 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 LDHAL6AQ6ZMR3 332 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 FAM196AQ6ZSG2 479 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 NECAB2Q7Z6G3 386 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 TBC1D1Q86TI0 1168 aaPredicted RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 MYLK4Q86YV6 388 aaPredicted RBP7.33□□□□□ -1.24
COPS3-216ENST00000579716 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
COPS3-216ENST00000579716 NIM1KQ8IY84 436 aa7.33□□□□□ -1.24
COPS3-216ENST00000579716 CARNMT1Q8N4J0 409 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms