RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 SCG2P13521 617 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 KCNA2P16389 499 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 TECP42680 631 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 NMIQ13287 307 aaPredicted RBP12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 MTMR3Q13615 1198 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 ESR2Q92731 530 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 EVI5LQ96CN4 794 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 FTHL17Q9BXU8 183 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 DLL3Q9NYJ7 618 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
SUPT4H1-203ENST00000579289 C9IYK1 514 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 GCOM1H8Y6P7 765 aaPredicted RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 NOP56O00567 594 aaKnown RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 STAM2O75886 525 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 POLR2MP0CAP2 368 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 HOXB8P17481 243 aaPredicted RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 TCF7P36402 384 aaPredicted RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 FAM189BP81408 668 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 PLCB3Q01970 1234 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 FCHSD1Q86WN1 690 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 CCDC105Q8IYK2 499 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 ZDHHC14Q8IZN3 488 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 COLGALT1Q8NBJ5 622 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 ADAM7Q9H2U9 754 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 CDHR5Q9HBB8 845 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 ERVK-5Q9HDB9 667 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 TYW1Q9NV66 732 aaKnown RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 ZNF215Q9UL58 517 aaPredicted RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 LZTS1Q9Y250 596 aa12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 TPRP12270 2363 aaKnown RBP12.93□□□□□ -0.34
SUPT4H1-203ENST00000579289 B4E1Z4 1266 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 KLRF2D3W0D1 207 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 AOC1P19801 751 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 SARSP49591 514 aaKnown RBP12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 PPFIA1Q13136 1202 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 MCTP2Q6DN12 878 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 TMEM40Q8WWA1 233 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 CNTNAP3BQ96NU0 1288 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 PIGSQ96S52 555 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 CNTNAP3Q9BZ76 1288 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 KAT14Q9H8E8 782 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 BAZ2BQ9UIF8 2168 aaKnown RBP12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 CHD6Q8TD26 2715 aa12.92□□□□□ -0.34
SUPT4H1-203ENST00000579289 FANCMQ8IYD8 2048 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 GPR179Q6PRD1 2367 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 MEIS2O14770 477 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 WEE2P0C1S8 567 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 INSRRP14616 1297 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 TMEM62Q0P6H9 643 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 ANGPT1Q15389 498 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 TMEM266Q2M3C6 531 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 LLGL2Q6P1M3 1020 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 TICAM2Q86XR7 235 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 MICAL1Q8TDZ2 1067 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 CELF4Q9BZC1 486 aaKnown RBP12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 RGS18Q9NS28 235 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 TMEM260Q9NX78 707 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 TRPV2Q9Y5S1 764 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 HCFC2Q9Y5Z7 792 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 ACACBO00763 2458 aa12.91□□□□□ -0.34
SUPT4H1-203ENST00000579289 FSD2A1L4K1 749 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 STAG3L1P0CL83 205 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 ITGB5P18084 799 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 MARK3P27448 753 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 NT5C2P49902 561 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 PDE1AP54750 535 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 SP4Q02446 784 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 DSC3Q14574 896 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 GNPTABQ3T906 1256 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 PLPP4Q5VZY2 271 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 TRAPPC12Q8WVT3 735 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 SEPT1Q8WYJ6 367 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 LIMD1Q9UGP4 676 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 NR2E1Q9Y466 385 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 PCDHA2Q9Y5H9 948 aa12.9□□□□□ -0.34
SUPT4H1-203ENST00000579289 C2orf71A6NGG8 1288 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 TBKBP1A7MCY6 615 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 CLASP2O75122 1294 aaKnown RBP12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 PDE4AP27815 886 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 CCDC178Q5BJE1 867 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 CYB5R4Q7L1T6 521 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 MRPL43Q8N983 215 aaKnown RBP12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 DTWD2Q8NBA8 298 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 TCF25Q9BQ70 676 aa12.89□□□□□ -0.35
SUPT4H1-203ENST00000579289 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms