RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 HAUS3Q68CZ6 603 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 TRMT1LQ7Z2T5 733 aaKnown RBP17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 C4orf19Q8IY42 314 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 PPP1R13LQ8WUF5 828 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 AK8Q96MA6 479 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 POLR3CQ9BUI4 534 aaPredicted RBP17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 GTF2IRD1Q9UHL9 959 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 ZNF862O60290 1169 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 EVI5O60447 810 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 PQBP1O60828 265 aaKnown RBP17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 PPP6R2O75170 966 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 OATP04181 439 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 INSRRP14616 1297 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 MUTP22033 750 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 RPA1P27694 616 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 PPFIA1Q13136 1202 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 OTUD6AQ7L8S5 288 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 FAM126BQ8IXS8 530 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 KRI1Q8N9T8 703 aaKnown RBP17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 LXNQ9BS40 222 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 SETD4Q9NVD3 440 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 NOD1Q9Y239 953 aa17.44■□□□□ 0.38
SLC6A4-205ENST00000579221 LYPLA2O95372 231 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 PRKCEQ02156 737 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 GRIK4Q16099 956 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 PTGISQ16647 500 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 GDF6Q6KF10 455 aaPredicted RBP17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 CATSPER3Q86XQ3 398 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 SNX29Q8TEQ0 813 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 NIFKQ9BYG3 293 aaKnown RBP17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 FBXO2Q9UK22 296 aaPredicted RBP17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 RCOR1Q9UKL0 485 aa17.43■□□□□ 0.38
SLC6A4-205ENST00000579221 SLC26A4O43511 780 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 B4GALT4O60513 344 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 MED24O75448 989 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 STBD1O95210 358 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 CD4P01730 458 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 SPATA31C1P0DKV0 1188 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 XRCC6P12956 609 aaKnown RBP eCLIP17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 IGBP1P78318 339 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 NACC1Q96RE7 527 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 SCAND2PQ9GZW5 306 aaPredicted RBP17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 TRMT13Q9NUP7 481 aaKnown RBP17.42■□□□□ 0.38
SLC6A4-205ENST00000579221 COL1A2P08123 1366 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 PP2D1A8MPX8 630 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 CLTBP09497 229 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 CDC25AP30304 524 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 HOXC8P31273 242 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 YWHABP31946 246 aaKnown RBP17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 UBA7P41226 1012 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 ZNF200P98182 395 aaPredicted RBP17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 GRIN1Q05586 938 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 FAAP100Q0VG06 881 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 CABP7Q86V35 215 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 LMBR1Q8WVP7 490 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 SPATA32Q96LK8 384 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 CLIC6Q96NY7 704 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 ANKEF1Q9NU02 776 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 TMEM39AQ9NV64 488 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 SEPT9Q9UHD8 586 aaPredicted RBP17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 NR2E3Q9Y5X4 410 aa17.41■□□□□ 0.38
SLC6A4-205ENST00000579221 MAGEB2O15479 319 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 TREHO43280 583 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 CUTAO60888 179 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 KLRC1P26715 233 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 ADAM17P78536 824 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 PTK7Q13308 1070 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 HIC1Q14526 733 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 ANO5Q75V66 913 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 C7orf61Q8IZ16 206 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 KCTD17Q8N5Z5 321 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 ZNF579Q8NAF0 562 aaKnown RBP17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 CALML4Q96GE6 196 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 MMTAG2Q9BU76 263 aaKnown RBP17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 PRKAG2Q9UGJ0 569 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 KIAA1024Q9UPX6 916 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 PPME1Q9Y570 386 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 SCN10AQ9Y5Y9 1956 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
SLC6A4-205ENST00000579221 MBLAC1A4D2B0 266 aaPredicted RBP17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 ME1P48163 572 aa17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 MLLT1Q03111 559 aaPredicted RBP17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 ZRSR1Q15695 479 aaKnown RBP17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 MTERF2Q49AM1 385 aa17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 XKR9Q5GH70 373 aa17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 MARCH8Q5T0T0 291 aa17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 MTHFD1LQ6UB35 978 aa17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 EXOC8Q8IYI6 725 aa17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
SLC6A4-205ENST00000579221 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms