RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 VCANP13611 3396 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 ENPP3O14638 875 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 HBP1O60381 514 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 SETQ01105 290 aaPredicted RBP18.04■□□□□ 0.48
CRLF3-203ENST00000578692 SWSAP1Q6NVH7 229 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 MIS18BP1Q6P0N0 1132 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 TSHZ1Q6ZSZ6 1077 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 IL27Q8NEV9 243 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 ZNF302Q9NR11 478 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 SH3GLB2Q9NR46 395 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 SQORQ9Y6N5 450 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 SIP14410 1827 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 SMIM35A0A1B0GVV1 85 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 M0QZ92 97 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 CIITAP33076 1130 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 NLRP5P59047 1200 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 TFF2Q03403 129 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 SSRP1Q08945 709 aaKnown RBP18.03■□□□□ 0.48
CRLF3-203ENST00000578692 AAK1Q2M2I8 961 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 PRR16Q569H4 304 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 PDXDC2PQ6P474 469 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 MTHFD1LQ6UB35 978 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 CCDC60Q8IWA6 550 aaPredicted RBP18.03■□□□□ 0.48
CRLF3-203ENST00000578692 TRIM22Q8IYM9 498 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 NME8Q8N427 588 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 FBXO22Q8NEZ5 403 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 SAMD11Q96NU1 681 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
CRLF3-203ENST00000578692 UPF3BQ9BZI7 483 aaKnown RBP18.03■□□□□ 0.48
CRLF3-203ENST00000578692 COG5Q9UP83 839 aa18.03■□□□□ 0.48
CRLF3-203ENST00000578692 CPLX1O14810 134 aa18.02■□□□□ 0.47
CRLF3-203ENST00000578692 KLRC1P26715 233 aa18.02■□□□□ 0.47
CRLF3-203ENST00000578692 TMEM62Q0P6H9 643 aa18.02■□□□□ 0.47
CRLF3-203ENST00000578692 ZNF746Q6NUN9 644 aaPredicted RBP18.02■□□□□ 0.47
CRLF3-203ENST00000578692 ATP8B4Q8TF62 1192 aa18.02■□□□□ 0.47
CRLF3-203ENST00000578692 IL17RAQ96F46 866 aa18.02■□□□□ 0.47
CRLF3-203ENST00000578692 CELF4Q9BZC1 486 aaKnown RBP18.02■□□□□ 0.47
CRLF3-203ENST00000578692 AGO3Q9H9G7 860 aaKnown RBP18.02■□□□□ 0.47
CRLF3-203ENST00000578692 PPP4R2Q9NY27 417 aa18.02■□□□□ 0.47
CRLF3-203ENST00000578692 TRPV2Q9Y5S1 764 aa18.02■□□□□ 0.47
CRLF3-203ENST00000578692 COL4A4P53420 1690 aaPredicted RBP18.01■□□□□ 0.47
CRLF3-203ENST00000578692 CD52P31358 61 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 USP11P51784 963 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 EPC2Q52LR7 807 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 ZNF484Q5JVG2 852 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 SMAP1Q8IYB5 467 aaPredicted RBP18.01■□□□□ 0.47
CRLF3-203ENST00000578692 ADAMTS19Q8TE59 1207 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 HLA-CQ95604 372 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 PDRG1Q9NUG6 133 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 PCDHA10Q9Y5I2 948 aa18.01■□□□□ 0.47
CRLF3-203ENST00000578692 TRANK1O15050 2925 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 TNFRSF10AO00220 468 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 EDIL3O43854 480 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 DEXIO95424 95 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 PSAPP07602 524 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 BMP1P13497 986 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 ATP4AP20648 1035 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 KRT76Q01546 638 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 STK3Q13188 491 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 CPLX2Q6PUV4 134 aaKnown RBP18■□□□□ 0.47
CRLF3-203ENST00000578692 TMEM192Q8IY95 271 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 CKAP2LQ8IYA6 745 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 MAFBQ9Y5Q3 323 aaPredicted RBP18■□□□□ 0.47
CRLF3-203ENST00000578692 COL1A2P08123 1366 aa18■□□□□ 0.47
CRLF3-203ENST00000578692 REV3LO60673 3130 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 RTN4RL1Q86UN2 441 aaPredicted RBP17.99■□□□□ 0.47
CRLF3-203ENST00000578692 FIBCD1Q8N539 461 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 BBXQ8WY36 941 aaPredicted RBP17.99■□□□□ 0.47
CRLF3-203ENST00000578692 LENG9Q96B70 501 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 FTHL17Q9BXU8 183 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 C22orf23Q9BZE7 217 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 PADI3Q9ULW8 664 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 PCDHA4Q9UN74 947 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 SAMM50Q9Y512 469 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 IGSF9BQ9UPX0 1349 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 KDM3AQ9Y4C1 1321 aa17.99■□□□□ 0.47
CRLF3-203ENST00000578692 H3BNC9 293 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 MSH4O15457 936 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 KCNQ1P51787 676 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 GPM6BQ13491 265 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 ERICH6BQ5W0A0 696 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 TRMT1LQ7Z2T5 733 aaKnown RBP17.98■□□□□ 0.47
CRLF3-203ENST00000578692 KIAA0319LQ8IZA0 1049 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 UHRF1Q96T88 793 aaPredicted RBP17.98■□□□□ 0.47
CRLF3-203ENST00000578692 GABBR1Q9UBS5 961 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 LOXHD1Q8IVV2 1947 aa17.98■□□□□ 0.47
CRLF3-203ENST00000578692 ZBTB42B2RXF5 422 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 MYH9P35579 1960 aaKnown RBP17.97■□□□□ 0.47
CRLF3-203ENST00000578692 PAK2Q13177 524 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 PTPROQ16827 1216 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 CUL9Q8IWT3 2517 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 BLIDQ8IZY5 108 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 LINC01599Q8WXQ3 324 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 ZNF689Q96CS4 500 aaPredicted RBP17.97■□□□□ 0.47
CRLF3-203ENST00000578692 MRPL38Q96DV4 380 aaKnown RBP17.97■□□□□ 0.47
CRLF3-203ENST00000578692 RIT2Q99578 217 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 GINS2Q9Y248 185 aa17.97■□□□□ 0.47
CRLF3-203ENST00000578692 SPTBN5Q9NRC6 3674 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms