RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 SCRN1Q12765 414 aa16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 LPIN1Q14693 890 aa16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PLPPR4Q7Z2D5 763 aa16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CCDC60Q8IWA6 550 aaPredicted RBP16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CCDC148Q8NFR7 591 aa16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 BICD2Q8TD16 824 aa16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 KCNJ14Q9UNX9 436 aa16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MUC6Q6W4X9 2439 aa16.07■□□□□ 0.16
HS3ST3A1-202ENST00000578576 IGKV6D-21A0A0A0MT36 114 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 LINC01553A4QN01 128 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 RRN3P2A6NIE6 340 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 EFCAB14O75071 495 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 DEXIO95424 95 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TAF2Q6P1X5 1199 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 RSPH3Q86UC2 560 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 LENG9Q96B70 501 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 ZNF302Q9NR11 478 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 GJB4Q9NTQ9 266 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MTCH2Q9Y6C9 303 aa16.06■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MSH4O15457 936 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 LPXNO60711 386 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 KLRC1P26715 233 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CIITAP33076 1130 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 AK2P54819 239 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MRPS5P82675 430 aaKnown RBP16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MRPS6P82932 125 aaKnown RBP16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 GRB10Q13322 594 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 NPY5RQ15761 445 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 FBXO47Q5MNV8 452 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MCTP2Q6DN12 878 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MIS18BP1Q6P0N0 1132 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MTHFD1LQ6UB35 978 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 RPAINQ86UA6 219 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 BLIDQ8IZY5 108 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TBCKQ8TEA7 893 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 AGO3Q9H9G7 860 aaKnown RBP16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PCDHA4Q9UN74 947 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PCDHA2Q9Y5H9 948 aa16.05■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CD52P31358 61 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 FAM160B1Q5W0V3 765 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TOP1MTQ969P6 601 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PPP1R16BQ96T49 567 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 C17orf80Q9BSJ5 609 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CDHR5Q9HBB8 845 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TBC1D22BQ9NU19 505 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 SAMM50Q9Y512 469 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 INSL6Q9Y581 213 aa16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 COL4A4P53420 1690 aaPredicted RBP16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TCF20Q9UGU0 1960 aaKnown RBP16.04■□□□□ 0.16
HS3ST3A1-202ENST00000578576 ZBTB42B2RXF5 422 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 M0R2N6 131 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 ENPP3O14638 875 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 HBP1O60381 514 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PFKFB2O60825 505 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 LARGE1O95461 756 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CTDNEP1O95476 244 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TDP2O95551 362 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 USP11P51784 963 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 ZNF746Q6NUN9 644 aaPredicted RBP16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 ATP8B4Q8TF62 1192 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 APBB2Q92870 758 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 C1QTNF1Q9BXJ1 281 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 GINS2Q9Y248 185 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 ARIH1Q9Y4X5 557 aaPredicted RBP16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PCDHA10Q9Y5I2 948 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TRPV2Q9Y5S1 764 aa16.03■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CHMP2AO43633 222 aa16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 GTPBP6O43824 516 aaPredicted RBP16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 PSAPP07602 524 aa16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 IBSPP21815 317 aaPredicted RBP16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 ERVK-21P61565 698 aa16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TMEM266Q2M3C6 531 aa16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 IER5Q5VY09 327 aa16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 RTN4RL1Q86UN2 441 aaPredicted RBP16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 TNPO1Q92973 898 aaKnown RBP16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 YME1L1Q96TA2 773 aa16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 CELF4Q9BZC1 486 aaKnown RBP16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 MAFBQ9Y5Q3 323 aaPredicted RBP16.02■□□□□ 0.16
HS3ST3A1-202ENST00000578576 NLRC5Q86WI3 1866 aa16.01■□□□□ 0.15
HS3ST3A1-202ENST00000578576 SMIM35A0A1B0GVV1 85 aa16.01■□□□□ 0.15
HS3ST3A1-202ENST00000578576 SLC26A2P50443 739 aa16.01■□□□□ 0.15
HS3ST3A1-202ENST00000578576 FOSBP53539 338 aa16.01■□□□□ 0.15
HS3ST3A1-202ENST00000578576 ANAPC15P60006 121 aa16.01■□□□□ 0.15
HS3ST3A1-202ENST00000578576 KRT76Q01546 638 aa16.01■□□□□ 0.15
HS3ST3A1-202ENST00000578576 TFF2Q03403 129 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms