RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 A0A1W2PQ64 194 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 A0A1W2PQD8 194 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 TMEM150BA6NC51 233 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 H3BRB1 525 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 ZNF862O60290 1169 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 KPNA6O60684 536 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 SLITRK3O94933 977 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 F2P00734 622 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 OATP04181 439 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 CAPN2P17655 700 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 PLCG1P19174 1290 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 PSEN2P49810 448 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 PSMC6P62333 389 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 GRB10Q13322 594 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 MFSD10Q14728 455 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 ECM1Q16610 540 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 CCDC73Q6ZRK6 1079 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 PLPPR4Q7Z2D5 763 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 AFAP1L1Q8TED9 768 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 KAT2BQ92831 832 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 VTI1AQ96AJ9 217 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 CCDC43Q96MW1 224 aaKnown RBP13.58□□□□□ -0.24
IFT20-207ENST00000578547 PNMA5Q96PV4 448 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 CCSER1Q9C0I3 900 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 GOLPH3LQ9H4A5 285 aa13.58□□□□□ -0.24
IFT20-207ENST00000578547 TUT1Q9H6E5 874 aaKnown RBP13.58□□□□□ -0.24
IFT20-207ENST00000578547 SEPT9Q9UHD8 586 aaPredicted RBP13.58□□□□□ -0.24
IFT20-207ENST00000578547 MAFBQ9Y5Q3 323 aaPredicted RBP13.58□□□□□ -0.24
IFT20-207ENST00000578547 A0A087X0B3 334 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 MOXD2PA6NHM9 499 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 DDX11L8A8MPP1 907 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 DKC1O60832 514 aaKnown RBP eCLIP13.57□□□□□ -0.24
IFT20-207ENST00000578547 ATP4AP20648 1035 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 MCM4P33991 863 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 STAT6P42226 847 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 SLC26A2P50443 739 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 NDUFA8P51970 172 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 UBE2HP62256 183 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 KIAA0753Q2KHM9 967 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 PLA2G4FQ68DD2 849 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 PIGOQ8TEQ8 1089 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 DHX58Q96C10 678 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
IFT20-207ENST00000578547 FAM167AQ96KS9 214 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 KATNAL1Q9BW62 490 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 NT5C3AQ9H0P0 336 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
IFT20-207ENST00000578547 A0A1W2PQ45 241 aaPredicted RBP13.56□□□□□ -0.24
IFT20-207ENST00000578547 A0A1W2PQY0 241 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 E9PMD0 336 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 ZBTB39O15060 712 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 POLR2DO15514 142 aaKnown RBP13.56□□□□□ -0.24
IFT20-207ENST00000578547 SLC26A4O43511 780 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 SSBP05455 408 aaKnown RBP eCLIP13.56□□□□□ -0.24
IFT20-207ENST00000578547 COL6A1P12109 1028 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 YWHABP31946 246 aaKnown RBP13.56□□□□□ -0.24
IFT20-207ENST00000578547 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 XKR3Q5GH77 459 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 FAM47CQ5HY64 1035 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 HYIQ5T013 277 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 RRAGBQ5VZM2 374 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 KCNK18Q7Z418 384 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 C4orf19Q8IY42 314 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 ATP8B4Q8TF62 1192 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 GLT1D1Q96MS3 346 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 SH2D3AQ9BRG2 576 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
IFT20-207ENST00000578547 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 C11orf49Q9H6J7 331 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 LMBRD1Q9NUN5 540 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 WDR81Q562E7 1941 aa13.56□□□□□ -0.24
IFT20-207ENST00000578547 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
IFT20-207ENST00000578547 CABYRO75952 493 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 SMIM10L2AP0DMW4 78 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 SMIM10L2BP0DMW5 78 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 LIG1P18858 919 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 SYKP43405 635 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 IGBP1P78318 339 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
IFT20-207ENST00000578547 MTERF2Q49AM1 385 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 ANO5Q75V66 913 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 C7orf31Q8N865 590 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 LRRC15Q8TF66 581 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
IFT20-207ENST00000578547 NACC1Q96RE7 527 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 NRBP2Q9NSY0 501 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
IFT20-207ENST00000578547 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 HPSEQ9Y251 543 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 GRIN2DO15399 1336 aa13.55□□□□□ -0.24
IFT20-207ENST00000578547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
IFT20-207ENST00000578547 ARHGEF35A5YM69 484 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 HAS3O00219 553 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 HBP1O60381 514 aa13.54□□□□□ -0.24
IFT20-207ENST00000578547 STBD1O95210 358 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms