RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CMA1P23946 247 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 HOXD10P28358 340 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 MARCKSP29966 332 aaPredicted RBP9.03□□□□□ -0.96
COPS3-215ENST00000578317 LONP1P36776 959 aaKnown RBP9.03□□□□□ -0.96
COPS3-215ENST00000578317 RGS2P41220 211 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 ME1P48163 572 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 UBXN2AP68543 259 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 MTMR1Q13613 665 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 IL17AQ16552 155 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 PLA2G4DQ86XP0 818 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 IGSF22Q8N9C0 903 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 SLC5A5Q92911 643 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 MAML3Q96JK9 1138 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 RIT2Q99578 217 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 TINF2Q9BSI4 451 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 WDR11Q9BZH6 1224 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 TBC1D22BQ9NU19 505 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 SYNGAP1Q96PV0 1343 aa9.03□□□□□ -0.96
COPS3-215ENST00000578317 RBM47A0AV96 593 aaKnown RBP9.02□□□□□ -0.96
COPS3-215ENST00000578317 IPO5O00410 1097 aaKnown RBP9.02□□□□□ -0.96
COPS3-215ENST00000578317 DHX15O43143 795 aaKnown RBP9.02□□□□□ -0.96
COPS3-215ENST00000578317 FKTNO75072 461 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 PSMD10O75832 226 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 ARP10275 920 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 AGERQ15109 404 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 NFKBIBQ15653 356 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 B3GNT9Q6UX72 402 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 OTOP1Q7RTM1 612 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.96
COPS3-215ENST00000578317 SIX5Q8N196 739 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 NPLOC4Q8TAT6 608 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 ERO1AQ96HE7 468 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 RAB34Q9BZG1 259 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 TTC12Q9H892 705 aaPredicted RBP9.02□□□□□ -0.96
COPS3-215ENST00000578317 AGO4Q9HCK5 861 aaKnown RBP9.02□□□□□ -0.96
COPS3-215ENST00000578317 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.96
COPS3-215ENST00000578317 SMCHD1A6NHR9 2005 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 GOLGA6L4A6NEF3 574 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 SLC26A4O43511 780 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 MARCH6O60337 910 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 SNAI1O95863 264 aaPredicted RBP9.02□□□□□ -0.97
COPS3-215ENST00000578317 TXKP42681 527 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 RPIAP49247 311 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 PRMT2P55345 433 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 PPP2R5CQ13362 524 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 OXLD1Q5BKU9 147 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 CCDC62Q6P9F0 684 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 ARMCX2Q7L311 632 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 GIMAP8Q8ND71 665 aaPredicted RBP9.02□□□□□ -0.97
COPS3-215ENST00000578317 APBA2Q99767 749 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 ZNF577Q9BSK1 485 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 KATNBL1Q9H079 304 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 ABHD16BQ9H3Z7 469 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 VTA1Q9NP79 307 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 SRRDQ9UH36 339 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 NRBP1Q9UHY1 535 aa9.02□□□□□ -0.97
COPS3-215ENST00000578317 NFASCO94856 1347 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 HTTP42858 3142 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 MYH6P13533 1939 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 VWA3AA6NCI4 1184 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 ZBTB24O43167 697 aaPredicted RBP9.01□□□□□ -0.97
COPS3-215ENST00000578317 ATP9AO75110 1047 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 GADD45BO75293 160 aaPredicted RBP9.01□□□□□ -0.97
COPS3-215ENST00000578317 KCNA2P16389 499 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 TECP42680 631 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 FLT3LGP49771 235 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 NEDD9Q14511 834 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 TMEM266Q2M3C6 531 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 SKOR2Q2VWA4 1001 aaPredicted RBP9.01□□□□□ -0.97
COPS3-215ENST00000578317 RESP18Q5W5W9 173 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 TAPT1Q6NXT6 567 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 SHC4Q6S5L8 630 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 ZNF296Q8WUU4 475 aaPredicted RBP9.01□□□□□ -0.97
COPS3-215ENST00000578317 CLIC6Q96NY7 704 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 ARHGAP39Q9C0H5 1083 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 CCSER1Q9C0I3 900 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 CSRNP2Q9H175 543 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 DDX41Q9UJV9 622 aaKnown RBP9.01□□□□□ -0.97
COPS3-215ENST00000578317 VAV3Q9UKW4 847 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 HPSEQ9Y251 543 aa9.01□□□□□ -0.97
COPS3-215ENST00000578317 GAS7O60861 476 aa9□□□□□ -0.97
COPS3-215ENST00000578317 MBD3O95983 291 aa9□□□□□ -0.97
COPS3-215ENST00000578317 CYP2B6P20813 491 aa9□□□□□ -0.97
COPS3-215ENST00000578317 SEC13P55735 322 aa9□□□□□ -0.97
COPS3-215ENST00000578317 CAP1Q01518 475 aa9□□□□□ -0.97
COPS3-215ENST00000578317 GRIN1Q05586 938 aa9□□□□□ -0.97
COPS3-215ENST00000578317 ITGB3BPQ13352 177 aaPredicted RBP9□□□□□ -0.97
COPS3-215ENST00000578317 ACVR2BQ13705 512 aa9□□□□□ -0.97
COPS3-215ENST00000578317 NBPF20Q3BBV1 942 aa9□□□□□ -0.97
COPS3-215ENST00000578317 LRCH2Q5VUJ6 765 aa9□□□□□ -0.97
COPS3-215ENST00000578317 IQSEC1Q6DN90 963 aa9□□□□□ -0.97
COPS3-215ENST00000578317 RDM1Q8NG50 284 aa9□□□□□ -0.97
COPS3-215ENST00000578317 C1orf216Q8TAB5 229 aa9□□□□□ -0.97
COPS3-215ENST00000578317 SCFD2Q8WU76 684 aa9□□□□□ -0.97
COPS3-215ENST00000578317 MRPS27Q92552 414 aaKnown RBP9□□□□□ -0.97
COPS3-215ENST00000578317 PYM1Q9BRP8 204 aaKnown RBP9□□□□□ -0.97
COPS3-215ENST00000578317 LRWD1Q9UFC0 647 aa9□□□□□ -0.97
COPS3-215ENST00000578317 COL11A1P12107 1806 aaPredicted RBP9□□□□□ -0.97
COPS3-215ENST00000578317 DKK1O94907 266 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms