RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 HBP1O60381 514 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 SCG2P13521 617 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 PDE4CQ08493 712 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 HOXA2O43364 376 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 ATP9AO75110 1047 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 INSRRP14616 1297 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 PLCB4Q15147 1175 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 FANCBQ8NB91 859 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 UNC80Q8N2C7 3258 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 FAM86C2PA6NEL3 165 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 STAT5BP51692 787 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 SPPL3Q8TCT6 385 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 PCYT2Q99447 389 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 OSBPL7Q9BZF2 842 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 LRFN2Q9ULH4 789 aa12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 MRPL42Q9Y6G3 142 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-214ENST00000578112 LOC730098B7Z3J9 87 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 PLEKHA8P1O95397 391 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 SREBF1P36956 1147 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 ACTR2P61160 394 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 CEP55Q53EZ4 464 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 TMEM184AQ6ZMB5 413 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 EDAQ92838 391 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 LSG1Q9H089 658 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 AGO4Q9HCK5 861 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 ERVK-5Q9HDB9 667 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 KCNH7Q9NS40 1196 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 TRPC6Q9Y210 931 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 PCDHB12Q9Y5F1 795 aa12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 SPTBN5Q9NRC6 3674 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-214ENST00000578112 STXBP3O00186 592 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 GPR182O15218 404 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 CYP3A4P08684 503 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 CD52P31358 61 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 IRS1P35568 1242 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 KRT76Q01546 638 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 MTHFD1LQ6UB35 978 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 ATP8B4Q8TF62 1192 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 RGS18Q9NS28 235 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 CNTNAP5Q8WYK1 1306 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 ESYT2A0FGR8 921 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 MEIS1O00470 390 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 SLC27A2O14975 620 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 ADCY7P51828 1080 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 SETQ01105 290 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 SMRP1Q8NCR6 262 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 AGO3Q9H9G7 860 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 PCDHB7Q9Y5E2 793 aa12.81□□□□□ -0.36
SMARCE1-214ENST00000578112 FSCN2O14926 492 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 TBX10O75333 385 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 ITGB1P05556 798 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 LAG3P18627 525 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 PTPN5P54829 565 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 SP4Q02446 784 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 NECTIN1Q15223 517 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 MIS18BP1Q6P0N0 1132 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 SMAP1Q8IYB5 467 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 FAM167AQ96KS9 214 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 NID2Q14112 1375 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 MARK3P27448 753 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 NDUFV1P49821 464 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 FAM189BP81408 668 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 KRT32Q14532 448 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 ABHD15Q6UXT9 468 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 SLC24A5Q71RS6 500 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 RTN4RL1Q86UN2 441 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 CCDC12Q8WUD4 166 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 ANO3Q9BYT9 981 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 NCOR1O75376 2440 aa12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 FNDC1Q4ZHG4 1894 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-214ENST00000578112 MAGEB2O15479 319 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 CRYBB1P53674 252 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 NAPAP54920 295 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 PLCB3Q01970 1234 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 CAMK1Q14012 370 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 ZNF746Q6NUN9 644 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 HEATR3Q7Z4Q2 680 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 ESYT1Q9BSJ8 1104 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 PHF7Q9BWX1 381 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 TMEM161AQ9NX61 479 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 TCEAL9Q9UHQ7 104 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 PPM1AP35813 382 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 CDC42EP1Q00587 391 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 NHLH1Q02575 133 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 UBE2SQ16763 222 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms