RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ARIH2O95376 493 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 GUCY2CP25092 1073 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 RARRES1P49788 294 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 HERC4Q5GLZ8 1057 aaPredicted RBP20.61■□□□□ 0.89
PRKCA-203ENST00000578063 CCDC62Q6P9F0 684 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 CAPNS2Q96L46 248 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 MED15Q96RN5 788 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 HSD3B7Q9H2F3 369 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 MLXIPQ9HAP2 919 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 SLC39A2Q9NP94 309 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.61■□□□□ 0.89
PRKCA-203ENST00000578063 ODF2LQ9ULJ1 636 aa20.61■□□□□ 0.89
PRKCA-203ENST00000578063 BACH1O14867 736 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 GAP43P17677 238 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
PRKCA-203ENST00000578063 RAD51AP2Q09MP3 1159 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 MAP2K5Q13163 448 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 LY6KQ17RY6 165 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 SWSAP1Q6NVH7 229 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 PADI6Q6TGC4 694 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 OTUD6AQ7L8S5 288 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 CCDC60Q8IWA6 550 aaPredicted RBP20.6■□□□□ 0.89
PRKCA-203ENST00000578063 GUF1Q8N442 669 aaKnown RBP20.6■□□□□ 0.89
PRKCA-203ENST00000578063 FANCLQ9NW38 375 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 MAPK8IP1Q9UQF2 711 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 COL4A3BPQ9Y5P4 624 aa20.6■□□□□ 0.89
PRKCA-203ENST00000578063 BICDL2A1A5D9 508 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 SORBS3O60504 671 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 HOXC6P09630 235 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 STX17P56962 302 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 CELF3Q5SZQ8 465 aaKnown RBP20.59■□□□□ 0.89
PRKCA-203ENST00000578063 SOCS4Q8WXH5 440 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 HPS3Q969F9 1004 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 TINF2Q9BSI4 451 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 TIPINQ9BVW5 301 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 TRIM5Q9C035 493 aa20.59■□□□□ 0.89
PRKCA-203ENST00000578063 IGKV6D-21A0A0A0MT36 114 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 RBM47A0AV96 593 aaKnown RBP20.58■□□□□ 0.89
PRKCA-203ENST00000578063 FAM13AO94988 1023 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 KIF20AO95235 890 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 TXNP10599 105 aaKnown RBP20.58■□□□□ 0.89
PRKCA-203ENST00000578063 SEPT1Q8WYJ6 367 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 ZHX3Q9H4I2 956 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 ZNF302Q9NR11 478 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 TELO2Q9Y4R8 837 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 PCDHA2Q9Y5H9 948 aa20.58■□□□□ 0.89
PRKCA-203ENST00000578063 ZNF862O60290 1169 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 AOC2O75106 756 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 SNAI1O95863 264 aaPredicted RBP20.58■□□□□ 0.88
PRKCA-203ENST00000578063 ZNF18P17022 549 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 CCNE1P24864 410 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 PRKCEQ02156 737 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 TPD52L1Q16890 204 aaPredicted RBP20.58■□□□□ 0.88
PRKCA-203ENST00000578063 TAPT1Q6NXT6 567 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 DHX37Q8IY37 1157 aaKnown RBP20.58■□□□□ 0.88
PRKCA-203ENST00000578063 NPLOC4Q8TAT6 608 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 P2RX5Q93086 422 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 KATNBL1Q9H079 304 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 SEL1LQ9UBV2 794 aa20.58■□□□□ 0.88
PRKCA-203ENST00000578063 MAFBQ9Y5Q3 323 aaPredicted RBP20.58■□□□□ 0.88
PRKCA-203ENST00000578063 GSTTP1A0A1W2PQM5 241 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 TNPO2O14787 897 aaKnown RBP20.57■□□□□ 0.88
PRKCA-203ENST00000578063 ZNF75DP51815 510 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 ZNF131P52739 623 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 IRF5Q13568 498 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 XKR9Q5GH70 373 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 XKR3Q5GH77 459 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 FAM160B1Q5W0V3 765 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 ANO5Q75V66 913 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 SFR1Q86XK3 245 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 MYOCDQ8IZQ8 938 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 USP6NLQ92738 828 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 ABHD16BQ9H3Z7 469 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 PARVGQ9HBI0 331 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 PDGFCQ9NRA1 345 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 OLFML3Q9NRN5 406 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 DOCK5Q9H7D0 1870 aa20.57■□□□□ 0.88
PRKCA-203ENST00000578063 NOP56O00567 594 aaKnown RBP20.56■□□□□ 0.88
PRKCA-203ENST00000578063 ECM2O94769 699 aaPredicted RBP20.56■□□□□ 0.88
PRKCA-203ENST00000578063 RGS2P41220 211 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 UTP14CQ5TAP6 766 aaKnown RBP20.56■□□□□ 0.88
PRKCA-203ENST00000578063 FOXR2Q6PJQ5 311 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 AFAP1L1Q8TED9 768 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 MCM3APO60318 1980 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 RSPH10B2B2RC85 870 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 STBD1O95210 358 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 RSPH10BP0C881 870 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 TCF7P36402 384 aaPredicted RBP20.56■□□□□ 0.88
PRKCA-203ENST00000578063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.56■□□□□ 0.88
PRKCA-203ENST00000578063 MRFAP1L1Q96HT8 127 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 SPATA33Q96N06 139 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 GPR20Q99678 358 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 APBA2Q99767 749 aa20.56■□□□□ 0.88
PRKCA-203ENST00000578063 SEPT9Q9UHD8 586 aaPredicted RBP20.56■□□□□ 0.88
PRKCA-203ENST00000578063 USO1O60763 962 aaKnown RBP20.55■□□□□ 0.88
PRKCA-203ENST00000578063 ATP1A3P13637 1013 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 FANCCQ00597 558 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 LAMC2Q13753 1193 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 CDKAL1Q5VV42 579 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 PLA2G4FQ68DD2 849 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms