RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LENG9Q96B70 501 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 MPHOSPH9Q99550 1183 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 KIAA1683Q9H0B3 1180 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 TOR3AQ9H497 397 aa4.31□□□□□ -1.72
TOP2A-202ENST00000577541 AGO3Q9H9G7 860 aaKnown RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 KIAA1522Q9P206 1035 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-202ENST00000577541 NOP56O00567 594 aaKnown RBP4.3□□□□□ -1.72
TOP2A-202ENST00000577541 LTFP02788 710 aa4.3□□□□□ -1.72
TOP2A-202ENST00000577541 POU3F3P20264 500 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-202ENST00000577541 SCNN1GP51170 649 aa4.3□□□□□ -1.72
TOP2A-202ENST00000577541 PTPAQ15257 358 aa4.3□□□□□ -1.72
TOP2A-202ENST00000577541 DPP8Q6V1X1 898 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-202ENST00000577541 RHOUQ7L0Q8 258 aa4.3□□□□□ -1.72
TOP2A-202ENST00000577541 SLC25A43Q8WUT9 341 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-202ENST00000577541 MRRFQ96E11 262 aaKnown RBP4.3□□□□□ -1.72
TOP2A-202ENST00000577541 MRGPRX3Q96LB0 322 aa4.3□□□□□ -1.72
TOP2A-202ENST00000577541 SLC6A20Q9NP91 592 aa4.3□□□□□ -1.72
TOP2A-202ENST00000577541 PCDHGB7Q9Y5F8 929 aa4.3□□□□□ -1.72
TOP2A-202ENST00000577541 ARHGEF17Q96PE2 2063 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-202ENST00000577541 COL4A3Q01955 1670 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 A0A1W2PQH9 124 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 DENND5AQ6IQ26 1287 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 Q6ZRM9 215 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 TRIM59Q8IWR1 403 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 C19orf47Q8N9M1 422 aaKnown RBP4.29□□□□□ -1.72
TOP2A-202ENST00000577541 MLST8Q9BVC4 326 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 ZDHHC5Q9C0B5 715 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 TELO2Q9Y4R8 837 aa4.29□□□□□ -1.72
TOP2A-202ENST00000577541 GRID2IPA4D2P6 1211 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 UNCXA6NJT0 531 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 HDLBPQ00341 1268 aaKnown RBP4.28□□□□□ -1.72
TOP2A-202ENST00000577541 PAK2Q13177 524 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 TUSC3Q13454 348 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 PRSS53Q2L4Q9 553 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 LY6G5CQ5SRR4 150 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 CCDC81Q6ZN84 652 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 GRASPQ7Z6J2 395 aaPredicted RBP4.28□□□□□ -1.72
TOP2A-202ENST00000577541 SYNE4Q8N205 404 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 SHCBP1Q8NEM2 672 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 PIP4K2CQ8TBX8 421 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 SCARB1Q8WTV0 552 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 APBA2Q99767 749 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 R3HDMLQ9H3Y0 253 aa4.28□□□□□ -1.72
TOP2A-202ENST00000577541 TBX1O43435 398 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 HMGCRP04035 888 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 LTBRP36941 435 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 GIPRP48546 466 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 MAN2A2P49641 1150 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 TESK1Q15569 626 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 SF1Q15637 639 aaKnown RBP4.27□□□□□ -1.73
TOP2A-202ENST00000577541 HECTD2Q5U5R9 776 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 NT5DC4Q86YG4 428 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 OR6P1Q8NGX9 317 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 PROKR1Q8TCW9 393 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 GPRASP2Q96D09 838 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 JAM3Q9BX67 310 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 TGIF2Q9GZN2 237 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 SH3BP1Q9Y3L3 701 aa4.27□□□□□ -1.73
TOP2A-202ENST00000577541 SPATA31A6Q5VVP1 1343 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 PMS2P1A4D2B8 440 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 SLC26A4O43511 780 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 B3GALT2O43825 422 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 FAM20BO75063 409 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 ECI1P42126 302 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 KCNQ1P51787 676 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 WDR72Q3MJ13 1102 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 ACBD5Q5T8D3 534 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-202ENST00000577541 MIEF2Q96C03 454 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 CRBNQ96SW2 442 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 GINM1Q9NU53 330 aa4.26□□□□□ -1.73
TOP2A-202ENST00000577541 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-202ENST00000577541 ACOT7O00154 380 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 ABHD16AO95870 558 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 HOXC12P31275 282 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 CASP7P55210 303 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 KIAA1211LQ6NV74 962 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 FBXO42Q6P3S6 717 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 GSPT2Q8IYD1 628 aaKnown RBP4.25□□□□□ -1.73
TOP2A-202ENST00000577541 ZNF276Q8N554 614 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 THAP3Q8WTV1 239 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-202ENST00000577541 BTN2A2Q8WVV5 523 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 SMG7Q92540 1137 aaKnown RBP4.25□□□□□ -1.73
TOP2A-202ENST00000577541 SHDQ96IW2 340 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 SEC16BQ96JE7 1060 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 OR10A2Q9H208 303 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 SLC39A2Q9NP94 309 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 RNF7Q9UBF6 113 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 PPARGC1AQ9UBK2 798 aaKnown RBP4.25□□□□□ -1.73
TOP2A-202ENST00000577541 TESQ9UGI8 421 aaKnown RBP4.25□□□□□ -1.73
TOP2A-202ENST00000577541 STRIP2Q9ULQ0 834 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 FZD1Q9UP38 647 aa4.25□□□□□ -1.73
TOP2A-202ENST00000577541 COL3A1P02461 1466 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-202ENST00000577541 XDHP47989 1333 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 ITGB1P05556 798 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 ITGAVP06756 1048 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 HOXB6P17509 224 aaKnown RBP4.24□□□□□ -1.73
TOP2A-202ENST00000577541 NR4A1P22736 598 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 HGFACQ04756 655 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 ZC3H7AQ8IWR0 971 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms