RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 C8orf37Q96NL8 207 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 LRRC37BQ96QE4 947 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 FBXO10Q9UK96 956 aa7.39□□□□□ -1.23
SMCHD1-202ENST00000577300 CCDC66A2RUB6 948 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 FOXS1O43638 330 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 CRTAMO95727 393 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 KRT15P19012 456 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 HS1BP3Q53T59 392 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 ZC3H7AQ8IWR0 971 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 Q8N1X5 172 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 GIMAP8Q8ND71 665 aaPredicted RBP7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 SCYL1Q96KG9 808 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 ZNF747Q9BV97 191 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 SMURF1Q9HCE7 757 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 INCENPQ9NQS7 918 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 GALNT8Q9NY28 637 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 BTBD7Q9P203 1132 aa7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 ZFR2Q9UPR6 939 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-202ENST00000577300 EFCAB14O75071 495 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 FSHBP01225 129 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 RAC3P60763 192 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 IL13RA1P78552 427 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 RBL2Q08999 1139 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 STILQ15468 1287 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 WDR72Q3MJ13 1102 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 TAX1BP1Q86VP1 789 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 WNK4Q96J92 1243 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 ZDHHC5Q9C0B5 715 aa7.37□□□□□ -1.23
SMCHD1-202ENST00000577300 PRAMEF25A6NGN4 478 aa7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 GTF2F1P35269 517 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 DNM2P50570 870 aa7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 SPDYAQ5MJ70 313 aa7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 GSTCDQ8NEC7 633 aa7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 DEPDC7Q96QD5 511 aa7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 BTBD2Q9BX70 525 aa7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 VPS11Q9H270 941 aa7.36□□□□□ -1.23
SMCHD1-202ENST00000577300 ACVRL1P37023 503 aa7.35□□□□□ -1.23
SMCHD1-202ENST00000577300 GDF5P43026 501 aa7.35□□□□□ -1.23
SMCHD1-202ENST00000577300 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
SMCHD1-202ENST00000577300 TRIM61Q5EBN2 209 aa7.35□□□□□ -1.23
SMCHD1-202ENST00000577300 SLC52A2Q9HAB3 445 aa7.35□□□□□ -1.23
SMCHD1-202ENST00000577300 OAZ3Q9UMX2 235 aa7.35□□□□□ -1.23
SMCHD1-202ENST00000577300 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 FAM221BA6H8Z2 402 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 MPIG6BO95866 241 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 APPP05067 770 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 MC4RP32245 332 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 NFYCQ13952 458 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 EIF4HQ15056 248 aaKnown RBP7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 PRKD1Q15139 912 aaPredicted RBP7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 NOSTRINQ8IVI9 506 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 EDAQ92838 391 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 SORCS2Q96PQ0 1159 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 AMNQ9BXJ7 453 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 MSL2Q9HCI7 577 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 SNTG2Q9NY99 539 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 NDOR1Q9UHB4 597 aa7.34□□□□□ -1.23
SMCHD1-202ENST00000577300 CYR61O00622 381 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 KCNK3O14649 394 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 FZD7O75084 574 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 RAD17O75943 681 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 AMHP03971 560 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 CR2P20023 1033 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 COMTP21964 271 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 RRADP55042 308 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 SEC23AQ15436 765 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 FUKQ8N0W3 1084 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 CELF4Q9BZC1 486 aaKnown RBP7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 SCAND2PQ9GZW5 306 aaPredicted RBP7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 SLC30A1Q9Y6M5 507 aa7.33□□□□□ -1.24
SMCHD1-202ENST00000577300 CCDC163A0A0D9SF12 145 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 ARHGAP6O43182 974 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 HMGCRP04035 888 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 ECE1P42892 770 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 KANK2Q63ZY3 851 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 CISD2Q8N5K1 135 aaKnown RBP7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 SLC7A14Q8TBB6 771 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 MKL1Q969V6 931 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 MAGEB10Q96LZ2 347 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 NR2E1Q9Y466 385 aa7.32□□□□□ -1.24
SMCHD1-202ENST00000577300 MATN2O00339 956 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 MMEP08473 750 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 ADCY8P40145 1251 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 KCNQ1P51787 676 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 DUSP8Q13202 625 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 AGBL4Q5VU57 503 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 TRIM68Q6AZZ1 485 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 USP51Q70EK9 711 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 LARP4Q71RC2 724 aaKnown RBP eCLIP7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 ADOQ96SZ5 270 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 OR10A5Q9H207 317 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 KCNH7Q9NS40 1196 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 UCKL1Q9NWZ5 548 aa7.31□□□□□ -1.24
SMCHD1-202ENST00000577300 A0A0G2JNJ9 132 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 SCDO00767 359 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 KCNQ2O43526 872 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 RASGRP1O95267 797 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms