RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 UNC45AQ9H3U1 944 aa17.21■□□□□ 0.35
SMG6-220ENST00000576218 IGKV6D-21A0A0A0MT36 114 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 BTBD18B2RXH4 712 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 SLC37A4O43826 429 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 EFCAB14O75071 495 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 MCM2P49736 904 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 PPP4R3AQ6IN85 833 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 BBXQ8WY36 941 aaPredicted RBP17.2■□□□□ 0.34
SMG6-220ENST00000576218 SEPT8Q92599 483 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 ZBED2Q9BTP6 218 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 CEP131Q9UPN4 1083 aa17.2■□□□□ 0.34
SMG6-220ENST00000576218 COL1A2P08123 1366 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 FAM205CA6NFA0 338 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 CXCL10P02778 98 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 ADAM17P78536 824 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 ZNF484Q5JVG2 852 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 IER5Q5VY09 327 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 MTHFD1LQ6UB35 978 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 RDM1Q8NG50 284 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 ZBTB10Q96DT7 871 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 FAM20AQ96MK3 541 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 PBX4Q9BYU1 374 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 SLC28A3Q9HAS3 691 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 NRBP2Q9NSY0 501 aa17.19■□□□□ 0.34
SMG6-220ENST00000576218 TMEM265A0A087WTH1 108 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 ABHD14A-ACY1A0A1B0GW23 586 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 MBLAC1A4D2B0 266 aaPredicted RBP17.18■□□□□ 0.34
SMG6-220ENST00000576218 EDIL3O43854 480 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 PSMD10O75832 226 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 GHRP10912 638 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 KLRC1P26715 233 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 PBX2P40425 430 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 RABGGTBP53611 331 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 PRKCEQ02156 737 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 TMEM62Q0P6H9 643 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 MBTPS1Q14703 1052 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 EARS2Q5JPH6 523 aaKnown RBP17.18■□□□□ 0.34
SMG6-220ENST00000576218 MARCH8Q5T0T0 291 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 SLFN12Q8IYM2 578 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 METTL13Q8N6R0 699 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 ETNPPLQ8TBG4 499 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 MBOAT7Q96N66 472 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 GINS2Q9Y248 185 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 MAFBQ9Y5Q3 323 aaPredicted RBP17.18■□□□□ 0.34
SMG6-220ENST00000576218 IGSF9BQ9UPX0 1349 aa17.18■□□□□ 0.34
SMG6-220ENST00000576218 TBX3O15119 743 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 AMHP03971 560 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 OATP04181 439 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 WDR5P61964 334 aaKnown RBP17.17■□□□□ 0.34
SMG6-220ENST00000576218 MRPS6P82932 125 aaKnown RBP17.17■□□□□ 0.34
SMG6-220ENST00000576218 CALCRLQ16602 461 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 PPP2R2DQ66LE6 453 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 NCAPH2Q6IBW4 605 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 TRAF7Q6Q0C0 670 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 DBF4BQ8NFT6 615 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 VWCEQ96DN2 955 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
SMG6-220ENST00000576218 NKX2-4Q9H2Z4 354 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 SEPT9Q9UHD8 586 aaPredicted RBP17.17■□□□□ 0.34
SMG6-220ENST00000576218 CDY2AQ9Y6F7 541 aa17.17■□□□□ 0.34
SMG6-220ENST00000576218 SMIM35A0A1B0GVV1 85 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 NEMFO60524 1076 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 BANK1Q8NDB2 785 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 APBB2Q92870 758 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 TNFRSF25Q93038 417 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 MAP7D2Q96T17 732 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 SEMA6BQ9H3T3 888 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 MTMR10Q9NXD2 777 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 NOL7Q9UMY1 257 aaKnown RBP17.16■□□□□ 0.34
SMG6-220ENST00000576218 PCDHA11Q9Y5I1 949 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 TRPV2Q9Y5S1 764 aa17.16■□□□□ 0.34
SMG6-220ENST00000576218 TLL1O43897 1013 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.343e-6■■■■■ 27.9
SMG6-220ENST00000576218 CHRNA1P02708 482 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 TMOD1P28289 359 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 GPNMBQ14956 572 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 UGCGQ16739 394 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 PLEKHG4Q58EX7 1191 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 FAM26DQ5JW98 314 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 MCTP1Q6DN14 999 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 FAM117BQ6P1L5 589 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 RPAINQ86UA6 219 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 HERC6Q8IVU3 1022 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 MYOCDQ8IZQ8 938 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 NME8Q8N427 588 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 FBXO18Q8NFZ0 1043 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 SCLT1Q96NL6 688 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 FOXP1Q9H334 677 aaPredicted RBP17.15■□□□□ 0.34
SMG6-220ENST00000576218 KCNMB3Q9NPA1 279 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
SMG6-220ENST00000576218 AKT3Q9Y243 479 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms