RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PLPP4Q5VZY2 271 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 NLRX1Q86UT6 975 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 GIMAP8Q8ND71 665 aaPredicted RBP18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 SEPT1Q8WYJ6 367 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 KRT23Q9C075 422 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 SMOC2Q9H3U7 446 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 CDH22Q9UJ99 828 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 SORCS3Q9UPU3 1222 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 TRPV2Q9Y5S1 764 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 GSTTP1A0A1W2PQM5 241 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 ATP9AO75110 1047 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 NFX1Q12986 1120 aaKnown RBP18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 TMEM266Q2M3C6 531 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 ASTLQ6HA08 431 aaPredicted RBP18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 PDE12Q6L8Q7 609 aaKnown RBP18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 TMEM184AQ6ZMB5 413 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 TICAM2Q86XR7 235 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 TMX1Q9H3N1 280 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 MFSD1Q9H3U5 465 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 HCSTQ9UBK5 93 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 SQORQ9Y6N5 450 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 PLXNA3P51805 1871 aa18.75■□□□□ 0.59
CTDNEP1-211ENST00000575783 FRMPD4Q14CM0 1322 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 INSRRP14616 1297 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 FAM102BQ5T8I3 360 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 PCNX4Q63HM2 1172 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 SMARCC2Q8TAQ2 1214 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 SMARCAD1Q9H4L7 1026 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 RIOX1Q9H6W3 641 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 TYW1Q9NV66 732 aaKnown RBP18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 PKD2L1Q9P0L9 805 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 FAM186AA6NE01 2351 aa18.74■□□□□ 0.59
CTDNEP1-211ENST00000575783 RRN3P2A6NIE6 340 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 C2CD4DB7Z1M9 353 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 FSCN2O14926 492 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 RPLP2P05387 115 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 SDSP20132 328 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 SARSP49591 514 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 KCNC3Q14003 757 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 IMMTQ16891 758 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 COLGALT1Q8NBJ5 622 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 TCF25Q9BQ70 676 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 CELF4Q9BZC1 486 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 ENTPD7Q9NQZ7 604 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 PUF60Q9UHX1 559 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 IGSF9BQ9UPX0 1349 aa18.73■□□□□ 0.59
CTDNEP1-211ENST00000575783 HIDE1A8MVS5 230 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 CYTH3O43739 400 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 ASGR2P07307 311 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 HOXB8P17481 243 aaPredicted RBP18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 SEC23AQ15436 765 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 MCTP2Q6DN12 878 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 XRRA1Q6P2D8 792 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 CWC27Q6UX04 472 aaKnown RBP18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 TRAPPC12Q8WVT3 735 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 CUL5Q93034 780 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 CNNM2Q9H8M5 875 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 GINS2Q9Y248 185 aa18.72■□□□□ 0.59
CTDNEP1-211ENST00000575783 DENND3A2RUS2 1198 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 KCNA2P16389 499 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 KRT76Q01546 638 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 GRM4Q14833 912 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 CES5AQ6NT32 575 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 FLCNQ8NFG4 579 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 RASGRP4Q8TDF6 673 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 ADAM2Q99965 735 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 POMKQ9H5K3 350 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 PCDHA2Q9Y5H9 948 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 DMXL1Q9Y485 3027 aa18.71■□□□□ 0.59
CTDNEP1-211ENST00000575783 MYH6P13533 1939 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 GVINP1Q7Z2Y8 2422 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 MGEA5O60502 916 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 TPRNQ4KMQ1 711 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 CYB5R4Q7L1T6 521 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 MRPS27Q92552 414 aaKnown RBP18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 CDHR1Q96JP9 859 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 LIMD1Q9UGP4 676 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 DNAH14Q0VDD8 3507 aa18.7■□□□□ 0.58
CTDNEP1-211ENST00000575783 WEE2P0C1S8 567 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 FGFR1P11362 822 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 CLCN5P51795 746 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 TMC7Q7Z402 723 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 KCNG4Q8TDN1 519 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 CASP10Q92851 521 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 GPRASP2Q96D09 838 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 NECTIN4Q96NY8 510 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 ADAM7Q9H2U9 754 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 AZI2Q9H6S1 392 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 CWH43Q9H720 699 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 NGRNQ9NPE2 291 aaKnown RBP18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 LZTS1Q9Y250 596 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 FRYLO94915 3013 aa18.69■□□□□ 0.58
CTDNEP1-211ENST00000575783 RPS6KA5O75582 802 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 ITGB5P18084 799 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 LAG3P18627 525 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 PLCB3Q01970 1234 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms