RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SEPT8Q92599 483 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 TBC1D22BQ9NU19 505 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 TPCN1Q9ULQ1 816 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 STK36Q9NRP7 1315 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 COL1A2P08123 1366 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 WDR81Q562E7 1941 aa11.99□□□□□ -0.49
LITAF-216ENST00000574848 CPLX1O14810 134 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 STX6O43752 255 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 EDIL3O43854 480 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 TRAK2O60296 914 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 CHRNA1P02708 482 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 INSRRP14616 1297 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 GJB2P29033 226 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 STAT5BP51692 787 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 HTRA4P83105 476 aaPredicted RBP11.98□□□□□ -0.49
LITAF-216ENST00000574848 SSRP1Q08945 709 aaKnown RBP11.98□□□□□ -0.49
LITAF-216ENST00000574848 CSPP1Q1MSJ5 1256 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 GALNT17Q6IS24 598 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 ZNF746Q6NUN9 644 aaPredicted RBP11.98□□□□□ -0.49
LITAF-216ENST00000574848 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
LITAF-216ENST00000574848 RSPH3Q86UC2 560 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 CCDC60Q8IWA6 550 aaPredicted RBP11.98□□□□□ -0.49
LITAF-216ENST00000574848 SMAP1Q8IYB5 467 aaPredicted RBP11.98□□□□□ -0.49
LITAF-216ENST00000574848 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
LITAF-216ENST00000574848 RASGRP4Q8TDF6 673 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 GTF3C6Q969F1 213 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 RAD9AQ99638 391 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 OSBPL7Q9BZF2 842 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 PCDHA4Q9UN74 947 aa11.98□□□□□ -0.49
LITAF-216ENST00000574848 RALGAPA2Q2PPJ7 1873 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 REV3LO60673 3130 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 IGSF9BQ9UPX0 1349 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 KDM3AQ9Y4C1 1321 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 LCHNA4D1U4 455 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 PFKFB2O60825 505 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 CDKL5O76039 1030 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 AMHP03971 560 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
LITAF-216ENST00000574848 USP11P51784 963 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 HMGN5P82970 282 aaKnown RBP11.97□□□□□ -0.49
LITAF-216ENST00000574848 KRT76Q01546 638 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 SCRN1Q12765 414 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 FAM160B1Q5W0V3 765 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 MCTP1Q6DN14 999 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.97□□□□□ -0.49
LITAF-216ENST00000574848 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
LITAF-216ENST00000574848 ATP8B4Q8TF62 1192 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 ZNF577Q9BSK1 485 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 IFIH1Q9BYX4 1025 aaKnown RBP11.97□□□□□ -0.49
LITAF-216ENST00000574848 TRPC6Q9Y210 931 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 SQORQ9Y6N5 450 aa11.97□□□□□ -0.49
LITAF-216ENST00000574848 MYH9P35579 1960 aaKnown RBP11.96□□□□□ -0.49
LITAF-216ENST00000574848 SMIM35A0A1B0GVV1 85 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.96□□□□□ -0.49
LITAF-216ENST00000574848 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 LINC01553A4QN01 128 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 HBP1O60381 514 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 LARGE1O95461 756 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
LITAF-216ENST00000574848 NLRP5P59047 1200 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 MRPS6P82932 125 aaKnown RBP11.96□□□□□ -0.49
LITAF-216ENST00000574848 LPIN1Q14693 890 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 PRR16Q569H4 304 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 FBXO47Q5MNV8 452 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 MIS18BP1Q6P0N0 1132 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 MOXD1Q6UVY6 613 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 TSHZ1Q6ZSZ6 1077 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 FAM43BQ6ZT52 329 aaPredicted RBP11.96□□□□□ -0.49
LITAF-216ENST00000574848 BLIDQ8IZY5 108 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 DNAJB3Q8WWF6 145 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 TOP1MTQ969P6 601 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 MBOAT7Q96N66 472 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 RIT2Q99578 217 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 ZNF302Q9NR11 478 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 INSL6Q9Y581 213 aa11.96□□□□□ -0.49
LITAF-216ENST00000574848 MAFBQ9Y5Q3 323 aaPredicted RBP11.96□□□□□ -0.49
LITAF-216ENST00000574848 CUL9Q8IWT3 2517 aa11.96□□□□□ -0.5
LITAF-216ENST00000574848 NLRC5Q86WI3 1866 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 CYP3A7-CYP3A51PA0A087WV96 503 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 ZBTB42B2RXF5 422 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 DDX39AO00148 427 aaKnown RBP11.95□□□□□ -0.5
LITAF-216ENST00000574848 MSH4O15457 936 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 LPXNO60711 386 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 MBD3O95983 291 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 GHRP10912 638 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 ATP4AP20648 1035 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 SYT1P21579 422 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 CYP3A7P24462 503 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 ERVK-21P61565 698 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 IGBP1P78318 339 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 STK3Q13188 491 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 PKP1Q13835 747 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 Q4G0T1 1027 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 LARP1BQ659C4 914 aaKnown RBP11.95□□□□□ -0.5
LITAF-216ENST00000574848 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms