RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 MYH9P35579 1960 aaKnown RBP29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 HBP1O60381 514 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 PFKFB2O60825 505 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 UPP2O95045 317 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 ATP4AP20648 1035 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 MRPS6P82932 125 aaKnown RBP29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 TMEM62Q0P6H9 643 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 MTHFD1LQ6UB35 978 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 ATP8B4Q8TF62 1192 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 INSL6Q9Y581 213 aa29.52■■■□□ 2.32
NPLOC4-215ENST00000574095 TRANK1O15050 2925 aa29.51■■■□□ 2.32
NPLOC4-215ENST00000574095 M0R2N6 131 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 MSH4O15457 936 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 CDKL5O76039 1030 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 KRT76Q01546 638 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 NPY5RQ15761 445 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 FBXO47Q5MNV8 452 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 TOP1MTQ969P6 601 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 TCEAL9Q9UHQ7 104 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 MTUS1Q9ULD2 1270 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 KCNJ14Q9UNX9 436 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 LOXHD1Q8IVV2 1947 aa29.51■■■□□ 2.31
NPLOC4-215ENST00000574095 LINC01553A4QN01 128 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 SEC24BO95487 1268 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 KLRC1P26715 233 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 IER5Q5VY09 327 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 KRT40Q6A162 431 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 TRMT1LQ7Z2T5 733 aaKnown RBP29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 SMAP1Q8IYB5 467 aaPredicted RBP29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 DAGLBQ8NCG7 672 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 COL25A1Q9BXS0 654 aaPredicted RBP29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 C22orf23Q9BZE7 217 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 SAMM50Q9Y512 469 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 PCDHA10Q9Y5I2 948 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 MTCH2Q9Y6C9 303 aa29.5■■■□□ 2.31
NPLOC4-215ENST00000574095 WDR81Q562E7 1941 aa29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 GTPBP6O43824 516 aaPredicted RBP29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 RPLP2P05387 115 aaKnown RBP29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 PSAPP07602 524 aa29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 HTRA4P83105 476 aaPredicted RBP29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 ANKRD1Q15327 319 aa29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 CKAP2LQ8IYA6 745 aa29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 GJA10Q969M2 543 aa29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 GABBR1Q9UBS5 961 aa29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 MAFBQ9Y5Q3 323 aaPredicted RBP29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 EVPLQ92817 2033 aa29.49■■■□□ 2.31
NPLOC4-215ENST00000574095 SMIM35A0A1B0GVV1 85 aa29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 POU3F3P20264 500 aaPredicted RBP29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 GRB10Q13322 594 aa29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 GALNT17Q6IS24 598 aa29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 IL17RAQ96F46 866 aa29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 TGS1Q96RS0 853 aaKnown RBP29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 AGO3Q9H9G7 860 aaKnown RBP29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 TRPV2Q9Y5S1 764 aa29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 REV3LO60673 3130 aa29.48■■■□□ 2.31
NPLOC4-215ENST00000574095 M0QZ92 97 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 CTDNEP1O95476 244 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 TDP2O95551 362 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 ERVK-21P61565 698 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 ZNF484Q5JVG2 852 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 TSHZ1Q6ZSZ6 1077 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 FAM177A1Q8N128 213 aaPredicted RBP29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 NECAB1Q8N987 351 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 SLC5A5Q92911 643 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 GJB4Q9NTQ9 266 aa29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 COL4A4P53420 1690 aaPredicted RBP29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 PRRC2BQ5JSZ5 2229 aaKnown RBP29.47■■■□□ 2.31
NPLOC4-215ENST00000574095 STK36Q9NRP7 1315 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 LPXNO60711 386 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 CD52P31358 61 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 Q4G0T1 1027 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 BBXQ8WY36 941 aaPredicted RBP29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 YME1L1Q96TA2 773 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 RIT2Q99578 217 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 PHF20Q9BVI0 1012 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 CELF4Q9BZC1 486 aaKnown RBP29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 SUGCTQ9HAC7 445 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 DISC1Q9NRI5 854 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 COL1A2P08123 1366 aa29.46■■■□□ 2.31
NPLOC4-215ENST00000574095 CYP3A7-CYP3A51PA0A087WV96 503 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 WDR64B1ANS9 1081 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 ZBTB42B2RXF5 422 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 ENPP3O14638 875 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 CHMP2AO43633 222 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 EIF5BO60841 1220 aaKnown RBP29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 GAS7O60861 476 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 LARGE1O95461 756 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 CYP3A7P24462 503 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 NONOQ15233 471 aaKnown RBP eCLIP29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 ME3Q16798 604 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 LRCH2Q5VUJ6 765 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 NME8Q8N427 588 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 SP7Q8TDD2 431 aaPredicted RBP29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 GDPD5Q8WTR4 605 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 C17orf80Q9BSJ5 609 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 TEKT3Q9BXF9 490 aa29.45■■■□□ 2.31
NPLOC4-215ENST00000574095 NEK4P51957 841 aa29.44■■■□□ 2.3
NPLOC4-215ENST00000574095 INF2Q27J81 1249 aa29.44■■■□□ 2.3
NPLOC4-215ENST00000574095 KRT25Q7Z3Z0 450 aa29.44■■■□□ 2.3
NPLOC4-215ENST00000574095 UNC45AQ9H3U1 944 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms