RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 RPAP3Q9H6T3 665 aaPredicted RBP17.59■□□□□ 0.41
USP43-204ENST00000573955 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
USP43-204ENST00000573955 SFI1A8K8P3 1242 aa17.59■□□□□ 0.41
USP43-204ENST00000573955 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
USP43-204ENST00000573955 GIT2Q14161 759 aa17.59■□□□□ 0.41
USP43-204ENST00000573955 LRRC55Q6ZSA7 311 aa17.59■□□□□ 0.41
USP43-204ENST00000573955 MICALL1Q8N3F8 863 aa17.59■□□□□ 0.41
USP43-204ENST00000573955 RUSC1Q9BVN2 902 aa17.59■□□□□ 0.41
USP43-204ENST00000573955 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
USP43-204ENST00000573955 PCDHA2Q9Y5H9 948 aa17.59■□□□□ 0.41
USP43-204ENST00000573955 A0A1W2PQC6 194 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 LMNB1P20700 586 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 LRRC63Q05C16 580 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 SFR1Q86XK3 245 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 CCDC155Q8N6L0 562 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 LRRN4CLQ8ND94 238 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 SCFD1Q8WVM8 642 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 CCDC51Q96ER9 411 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.41
USP43-204ENST00000573955 EHMT1Q9H9B1 1298 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 RABGAP1Q9Y3P9 1069 aa17.58■□□□□ 0.41
USP43-204ENST00000573955 RASSF10A6NK89 507 aa17.58■□□□□ 0.4
USP43-204ENST00000573955 PSMD10O75832 226 aa17.58■□□□□ 0.4
USP43-204ENST00000573955 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.4
USP43-204ENST00000573955 ABL1P00519 1130 aa17.58■□□□□ 0.4
USP43-204ENST00000573955 FKBP15Q5T1M5 1219 aa17.58■□□□□ 0.4
USP43-204ENST00000573955 FOXR1Q6PIV2 292 aa17.58■□□□□ 0.4
USP43-204ENST00000573955 SYT2Q8N9I0 419 aaPredicted RBP17.58■□□□□ 0.4
USP43-204ENST00000573955 CLEC4DQ8WXI8 215 aa17.58■□□□□ 0.4
USP43-204ENST00000573955 LPAR1Q92633 364 aa17.58■□□□□ 0.4
USP43-204ENST00000573955 A0A087WUV0 522 aaPredicted RBP17.57■□□□□ 0.4
USP43-204ENST00000573955 SASH3O75995 380 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 TBC1D8O95759 1140 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 CYP26C1Q6V0L0 522 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 NDST4Q9H3R1 872 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 FAM207AQ9NSI2 230 aaPredicted RBP17.57■□□□□ 0.4
USP43-204ENST00000573955 LTBP3Q9NS15 1303 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 ANKRD65E5RJM6 399 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 ITGB5P18084 799 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 CCDC40Q4G0X9 1142 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 VWA3BQ502W6 1294 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 TRMT1LQ7Z2T5 733 aaKnown RBP17.57■□□□□ 0.4
USP43-204ENST00000573955 TMTC1Q8IUR5 882 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 OR8K1Q8NGG5 319 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 MIEF2Q96C03 454 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 WDR11Q9BZH6 1224 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 UNC45AQ9H3U1 944 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 GPRC5DQ9NZD1 345 aa17.57■□□□□ 0.4
USP43-204ENST00000573955 NEBLO76041 1014 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 SLITRK3O94933 977 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 EIF2AK2P19525 551 aaKnown RBP17.56■□□□□ 0.4
USP43-204ENST00000573955 IRX1P78414 480 aaPredicted RBP17.56■□□□□ 0.4
USP43-204ENST00000573955 TTC19Q6DKK2 380 aaPredicted RBP17.56■□□□□ 0.4
USP43-204ENST00000573955 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 SLC38A10Q9HBR0 1119 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 WRAP73Q9P2S5 460 aaPredicted RBP17.56■□□□□ 0.4
USP43-204ENST00000573955 CAPN11Q9UMQ6 739 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 IPO5O00410 1097 aaKnown RBP17.56■□□□□ 0.4
USP43-204ENST00000573955 EPHB6O15197 1021 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 MYBP10242 640 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 HSD17B4P51659 736 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 HMGCS2P54868 508 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 TMEM132AQ24JP5 1023 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 ZCWPW2Q504Y3 356 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 NAIF1Q69YI7 327 aaPredicted RBP17.56■□□□□ 0.4
USP43-204ENST00000573955 NSMFQ6X4W1 530 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 ATG4CQ96DT6 458 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 MMRN2Q9H8L6 949 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 ZHX2Q9Y6X8 837 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 PHLPP2Q6ZVD8 1323 aa17.56■□□□□ 0.4
USP43-204ENST00000573955 PRPF6O94906 941 aaKnown RBP17.55■□□□□ 0.4
USP43-204ENST00000573955 FGFR1OPO95684 399 aaKnown RBP17.55■□□□□ 0.4
USP43-204ENST00000573955 FKBP3Q00688 224 aaKnown RBP17.55■□□□□ 0.4
USP43-204ENST00000573955 DCAF15Q66K64 600 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 SMCR8Q8TEV9 937 aaPredicted RBP17.55■□□□□ 0.4
USP43-204ENST00000573955 FAXDC2Q96IV6 333 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 HSD17B14Q9BPX1 270 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 POLR3CQ9BUI4 534 aaPredicted RBP17.55■□□□□ 0.4
USP43-204ENST00000573955 PICK1Q9NRD5 415 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 PPP1R9AQ9ULJ8 1098 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 TFR2Q9UP52 801 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 GOLGA6L9A6NEM1 432 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 MAN2A1Q16706 1144 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 TSR1Q2NL82 804 aaKnown RBP17.55■□□□□ 0.4
USP43-204ENST00000573955 C9orf131Q5VYM1 1079 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 GBP6Q6ZN66 633 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 SCYL3Q8IZE3 742 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
USP43-204ENST00000573955 TAAR1Q96RJ0 339 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 MXRA8Q9BRK3 442 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 PRDM16Q9HAZ2 1276 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 PITPNM2Q9BZ72 1349 aa17.55■□□□□ 0.4
USP43-204ENST00000573955 TBCAO75347 108 aaKnown RBP17.54■□□□□ 0.4
USP43-204ENST00000573955 EYA4O95677 639 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
USP43-204ENST00000573955 WDR59Q6PJI9 974 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 TTYH3Q9C0H2 523 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 COL4A3BPQ9Y5P4 624 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 FRMD3A2A2Y4 597 aa17.54■□□□□ 0.4
USP43-204ENST00000573955 MYCLP12524 364 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms