RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 AAASQ9NRG9 546 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 TRPC6Q9Y210 931 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 TRPV2Q9Y5S1 764 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 GSTTP1A0A1W2PQM5 241 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 MBLAC1A4D2B0 266 aaPredicted RBP14.02□□□□□ -0.17
PRPF8-208ENST00000573716 TBKBP1A7MCY6 615 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 GALR2O43603 387 aaPredicted RBP14.02□□□□□ -0.17
PRPF8-208ENST00000573716 CYTH3O43739 400 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 NFX1Q12986 1120 aaKnown RBP14.02□□□□□ -0.17
PRPF8-208ENST00000573716 TMEM266Q2M3C6 531 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 PLPP4Q5VZY2 271 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 PCNX4Q63HM2 1172 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 KREMEN2Q8NCW0 462 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 TRAPPC12Q8WVT3 735 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 SEPT1Q8WYJ6 367 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 SUSD6Q92537 303 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 RIPOR3Q96MK2 946 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 TMEM260Q9NX78 707 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 GINS2Q9Y248 185 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 PCDHB7Q9Y5E2 793 aa14.02□□□□□ -0.17
PRPF8-208ENST00000573716 FNDC1Q4ZHG4 1894 aaPredicted RBP14.01□□□□□ -0.17
PRPF8-208ENST00000573716 RRN3P2A6NIE6 340 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 IFIT3O14879 490 aaKnown RBP14.01□□□□□ -0.17
PRPF8-208ENST00000573716 ATP9AO75110 1047 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 FGF18O76093 207 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 INSRRP14616 1297 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 ERVFC1P60507 584 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 APOBRQ0VD83 1088 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 TRDNQ13061 729 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 DUSP6Q16828 381 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 DIEXFQ68CQ4 756 aaKnown RBP14.01□□□□□ -0.17
PRPF8-208ENST00000573716 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 CDCA3Q99618 268 aaPredicted RBP14.01□□□□□ -0.17
PRPF8-208ENST00000573716 DSCC1Q9BVC3 393 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 ENTPD7Q9NQZ7 604 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 HCSTQ9UBK5 93 aa14.01□□□□□ -0.17
PRPF8-208ENST00000573716 RIF1Q5UIP0 2472 aaKnown RBP14.01□□□□□ -0.17
PRPF8-208ENST00000573716 ERICH2A1L162 156 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 FSD2A1L4K1 749 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 DENND3A2RUS2 1198 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 PRR23AA6NEV1 266 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 KCNA2P16389 499 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 UBE3AQ05086 875 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 B4GALNT3Q6L9W6 998 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 ANKRD54Q6NXT1 300 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 XRRA1Q6P2D8 792 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 CRIPAKQ8N1N5 446 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 COLGALT1Q8NBJ5 622 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 CDHR1Q96JP9 859 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 CELF4Q9BZC1 486 aaKnown RBP14□□□□□ -0.17
PRPF8-208ENST00000573716 SENP2Q9HC62 589 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 CDH22Q9UJ99 828 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 NR2E1Q9Y466 385 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 MYO10Q9HD67 2058 aa14□□□□□ -0.17
PRPF8-208ENST00000573716 IGSF9BQ9UPX0 1349 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 FAM186AA6NE01 2351 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 RPLP2P05387 115 aaKnown RBP13.99□□□□□ -0.17
PRPF8-208ENST00000573716 SARSP49591 514 aaKnown RBP13.99□□□□□ -0.17
PRPF8-208ENST00000573716 KRT76Q01546 638 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 WTAPQ15007 396 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 FRMD5Q7Z6J6 570 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 GPRASP2Q96D09 838 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 S1PR5Q9H228 398 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 TMX1Q9H3N1 280 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 MFSD1Q9H3U5 465 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 AZI2Q9H6S1 392 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
PRPF8-208ENST00000573716 PROB1E7EW31 1015 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 HIP1O00291 1037 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 CA8P35219 290 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 NUBP1P53384 320 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 MTMR1Q13613 665 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 MTMR3Q13615 1198 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 PDE12Q6L8Q7 609 aaKnown RBP13.98□□□□□ -0.17
PRPF8-208ENST00000573716 SYCE2Q6PIF2 218 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 CATIPQ7Z7H3 387 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 TMEM105Q8N8V8 129 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 RRP36Q96EU6 259 aaKnown RBP13.98□□□□□ -0.17
PRPF8-208ENST00000573716 ADAM2Q99965 735 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 TCF25Q9BQ70 676 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 SMOC2Q9H3U7 446 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 TYW1Q9NV66 732 aaKnown RBP13.98□□□□□ -0.17
PRPF8-208ENST00000573716 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
PRPF8-208ENST00000573716 PCDHA2Q9Y5H9 948 aa13.98□□□□□ -0.17
PRPF8-208ENST00000573716 MEIS2O14770 477 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 MGEA5O60502 916 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 RPS6KA5O75582 802 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 BRD1O95696 1058 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 FGFR1P11362 822 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 ITGB5P18084 799 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 PLCB4Q15147 1175 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
PRPF8-208ENST00000573716 NKD2Q969F2 451 aaPredicted RBP13.97□□□□□ -0.17
PRPF8-208ENST00000573716 PPP1R16BQ96T49 567 aa13.97□□□□□ -0.17
PRPF8-208ENST00000573716 JPH1Q9HDC5 661 aaPredicted RBP13.97□□□□□ -0.17
PRPF8-208ENST00000573716 PUF60Q9UHX1 559 aaKnown RBP13.97□□□□□ -0.17
PRPF8-208ENST00000573716 SORCS3Q9UPU3 1222 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms