RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 WDR64B1ANS9 1081 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 ZBTB42B2RXF5 422 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 HBP1O60381 514 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 CHRNA1P02708 482 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 PSAPP07602 524 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 IGBP1P78318 339 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 EARS2Q5JPH6 523 aaKnown RBP18.26■□□□□ 0.51
NDE1-205ENST00000572756 LRCH2Q5VUJ6 765 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 DBF4BQ8NFT6 615 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 DNAJB3Q8WWF6 145 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 GJA10Q969M2 543 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 PCDHA2Q9Y5H9 948 aa18.26■□□□□ 0.51
NDE1-205ENST00000572756 SLC37A4O43826 429 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 GAS7O60861 476 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 EFCAB14O75071 495 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 MYOGP15173 224 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 DEFB103AP81534 67 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 NR5A1Q13285 461 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 GRIN2CQ14957 1233 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 LETM2Q2VYF4 491 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 PPP4R3AQ6IN85 833 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 PIK3AP1Q6ZUJ8 805 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 NEK8Q86SG6 692 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 HERC6Q8IVU3 1022 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 CCDC83Q8IWF9 413 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 TEKT3Q9BXF9 490 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 NKX2-4Q9H2Z4 354 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 UNC45AQ9H3U1 944 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 DISC1Q9NRI5 854 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 DDX25Q9UHL0 483 aaKnown RBP18.25■□□□□ 0.51
NDE1-205ENST00000572756 TCEAL9Q9UHQ7 104 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 COL1A2P08123 1366 aa18.25■□□□□ 0.51
NDE1-205ENST00000572756 FAM205CA6NFA0 338 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 MMP1P03956 469 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 RPLP2P05387 115 aaKnown RBP18.24■□□□□ 0.51
NDE1-205ENST00000572756 GCFC2P16383 781 aaKnown RBP18.24■□□□□ 0.51
NDE1-205ENST00000572756 KRT2P35908 639 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 KCNJ6P48051 423 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 IKBKEQ14164 716 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 MTHFD1LQ6UB35 978 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 RSPH3Q86UC2 560 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 ZSCAN31Q96LW9 406 aaPredicted RBP18.24■□□□□ 0.51
NDE1-205ENST00000572756 LLPHQ9BRT6 129 aaKnown RBP18.24■□□□□ 0.51
NDE1-205ENST00000572756 KCNMB3Q9NPA1 279 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 SH2B1Q9NRF2 756 aaPredicted RBP18.24■□□□□ 0.51
NDE1-205ENST00000572756 GABBR1Q9UBS5 961 aa18.24■□□□□ 0.51
NDE1-205ENST00000572756 EYSQ5T1H1 3165 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 SMIM35A0A1B0GVV1 85 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 ZNF862O60290 1169 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 SFNP31947 248 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 JAK3P52333 1124 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 RABEP1Q15276 862 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 ZNF484Q5JVG2 852 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 KRT40Q6A162 431 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 RDM1Q8NG50 284 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 BBXQ8WY36 941 aaPredicted RBP18.23■□□□□ 0.51
NDE1-205ENST00000572756 MYLIPQ8WY64 445 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 SEPT8Q92599 483 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 CDY2AQ9Y6F7 541 aa18.23■□□□□ 0.51
NDE1-205ENST00000572756 CHMP2AO43633 222 aa18.22■□□□□ 0.51
NDE1-205ENST00000572756 KLRC1P26715 233 aa18.22■□□□□ 0.51
NDE1-205ENST00000572756 MRPS6P82932 125 aaKnown RBP18.22■□□□□ 0.51
NDE1-205ENST00000572756 UGCGQ16739 394 aa18.22■□□□□ 0.51
NDE1-205ENST00000572756 TMCO2Q7Z6W1 182 aaPredicted RBP18.22■□□□□ 0.51
NDE1-205ENST00000572756 NAP1L4Q99733 375 aaKnown RBP18.22■□□□□ 0.51
NDE1-205ENST00000572756 FAM49AQ9H0Q0 323 aaPredicted RBP18.22■□□□□ 0.51
NDE1-205ENST00000572756 SLC28A3Q9HAS3 691 aa18.22■□□□□ 0.51
NDE1-205ENST00000572756 BRMS1Q9HCU9 246 aa18.22■□□□□ 0.51
NDE1-205ENST00000572756 TRANK1O15050 2925 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 BTBD18B2RXH4 712 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 CCNT1O60563 726 aaKnown RBP18.21■□□□□ 0.51
NDE1-205ENST00000572756 C22orf31O95567 290 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 CA3P07451 260 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 GHRP10912 638 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 FOSBP53539 338 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 LPIN1Q14693 890 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 FBXO47Q5MNV8 452 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.21■□□□□ 0.51
NDE1-205ENST00000572756 CKAP2LQ8IYA6 745 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
NDE1-205ENST00000572756 NME8Q8N427 588 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 HAS1Q92839 578 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 APBB2Q92870 758 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 FAM167AQ96KS9 214 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 FAM20AQ96MK3 541 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 IFIH1Q9BYX4 1025 aaKnown RBP18.21■□□□□ 0.51
NDE1-205ENST00000572756 VAV3Q9UKW4 847 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 KDM3AQ9Y4C1 1321 aa18.21■□□□□ 0.51
NDE1-205ENST00000572756 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.2■□□□□ 0.5
NDE1-205ENST00000572756 TBX3O15119 743 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 ARHGEF15O94989 841 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 GJB5O95377 273 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 OATP04181 439 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 PRKCEQ02156 737 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 PPP2R5CQ13362 524 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 TRIM29Q14134 588 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 IER5Q5VY09 327 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 PPP2R2DQ66LE6 453 aa18.2■□□□□ 0.5
NDE1-205ENST00000572756 MIER3Q7Z3K6 550 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms