RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 RSPH10B2B2RC85 870 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 RSPH10BP0C881 870 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 PDIA4P13667 645 aaKnown RBP15.69■□□□□ 0.1
RPAIN-211ENST00000572174 PSMC5P62195 406 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 SHHQ15465 462 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 EARS2Q5JPH6 523 aaKnown RBP15.69■□□□□ 0.1
RPAIN-211ENST00000572174 TMEM240Q5SV17 173 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 IER5Q5VY09 327 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 EXOC8Q8IYI6 725 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 NME8Q8N427 588 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 PPP1R13LQ8WUF5 828 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 HERVK_113Q902F9 699 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 DHX38Q92620 1227 aaKnown RBP15.69■□□□□ 0.1
RPAIN-211ENST00000572174 SNX21Q969T3 373 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 SCLYQ96I15 445 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.69■□□□□ 0.13e-12■□□□□ 9
RPAIN-211ENST00000572174 FTOQ9C0B1 505 aaKnown RBP eCLIP15.69■□□□□ 0.1
RPAIN-211ENST00000572174 PCDHA12Q9UN75 941 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 TELO2Q9Y4R8 837 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 PPME1Q9Y570 386 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 PCDHA2Q9Y5H9 948 aa15.69■□□□□ 0.1
RPAIN-211ENST00000572174 MYH15Q9Y2K3 1946 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 LAD1O00515 517 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 MAGEB2O15479 319 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 DTNBO60941 627 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 OATP04181 439 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 P4HBP07237 508 aaKnown RBP15.68■□□□□ 0.1
RPAIN-211ENST00000572174 TMOD1P28289 359 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 IGBP1P78318 339 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 ZNF200P98182 395 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-211ENST00000572174 PRKCEQ02156 737 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 TMEM266Q2M3C6 531 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 TRIM71Q2Q1W2 868 aaKnown RBP15.68■□□□□ 0.1
RPAIN-211ENST00000572174 RILPL1Q5EBL4 403 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 TTC38Q5R3I4 469 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 ZNF618Q5T7W0 954 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
RPAIN-211ENST00000572174 MCTP1Q6DN14 999 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 CNKSR3Q6P9H4 555 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 B3GNT9Q6UX72 402 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 ZNF365Q70YC5 407 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 APBB2Q92870 758 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 UIMC1Q96RL1 719 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-211ENST00000572174 RAB34Q9BZG1 259 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 STK24Q9Y6E0 443 aa15.68■□□□□ 0.1
RPAIN-211ENST00000572174 RANBP2P49792 3224 aaKnown RBP15.68■□□□□ 0.1
RPAIN-211ENST00000572174 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-211ENST00000572174 SMIM35A0A1B0GVV1 85 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-211ENST00000572174 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 MCM7P33993 719 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 QARSP47897 775 aaKnown RBP15.67■□□□□ 0.1
RPAIN-211ENST00000572174 FXR1P51114 621 aaKnown RBP eCLIP15.67■□□□□ 0.1
RPAIN-211ENST00000572174 SMAD3P84022 425 aaKnown RBP15.67■□□□□ 0.1
RPAIN-211ENST00000572174 EPHA7Q15375 998 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 FAM26DQ5JW98 314 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 ODR4Q5SWX8 454 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 C9orf50Q5SZB4 431 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 DEFB128Q7Z7B8 93 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 USP38Q8NB14 1042 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 VAV3Q9UKW4 847 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 SQORQ9Y6N5 450 aa15.67■□□□□ 0.1
RPAIN-211ENST00000572174 CXCL10P02778 98 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 HSP90AA1P07900 732 aaKnown RBP15.66■□□□□ 0.1
RPAIN-211ENST00000572174 OR52Z1P0C646 297 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 ACRP10323 421 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 KCNJ6P48051 423 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 MTHFD1LQ6UB35 978 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 BRAPQ7Z569 592 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 ERMNQ8TAM6 284 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 HAS1Q92839 578 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 MAP7D2Q96T17 732 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 SLC9A7Q96T83 725 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 TTC12Q9H892 705 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-211ENST00000572174 SLC4A7Q9Y6M7 1214 aa15.66■□□□□ 0.1
RPAIN-211ENST00000572174 TMEM265A0A087WTH1 108 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 ABHD14A-ACY1A0A1B0GW23 586 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 ZBBXA8MT70 800 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 BMP15O95972 392 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 ATP2B1P20020 1258 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 KLRC1P26715 233 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 TXKP42681 527 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 EPHB4P54760 987 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 MRPS6P82932 125 aaKnown RBP15.65■□□□□ 0.1
RPAIN-211ENST00000572174 CDC42EP1Q00587 391 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 TBC1D8BQ0IIM8 1120 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 IKBKEQ14164 716 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 HIC1Q14526 733 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 RAB30Q15771 203 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 MARCH8Q5T0T0 291 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 RASIP1Q5U651 963 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 HAUS3Q68CZ6 603 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 NCAPH2Q6IBW4 605 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 OTUD6AQ7L8S5 288 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 PHOSPHO2Q8TCD6 241 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 SEPT8Q92599 483 aa15.65■□□□□ 0.1
RPAIN-211ENST00000572174 ZSWIM4Q9H7M6 989 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms