RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 DDX25Q9UHL0 483 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-213ENST00000571886 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
GTF3C1-213ENST00000571886 PCDHA10Q9Y5I2 948 aa11.58□□□□□ -0.56
GTF3C1-213ENST00000571886 SLC4A7Q9Y6M7 1214 aa11.58□□□□□ -0.56
GTF3C1-213ENST00000571886 MYO9BQ13459 2157 aa11.58□□□□□ -0.56
GTF3C1-213ENST00000571886 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 RRN3P2A6NIE6 340 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 EML1O00423 815 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 HBP1O60381 514 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 CCNT1O60563 726 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 GAS7O60861 476 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 STBD1O95210 358 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 PSAPP07602 524 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 KLRC1P26715 233 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 DEFB103AP81534 67 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 PLEKHG4Q58EX7 1191 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 ZNF697Q5TEC3 545 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 CNKSR3Q6P9H4 555 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 MTHFD1LQ6UB35 978 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 ATP8B4Q8TF62 1192 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 LLPHQ9BRT6 129 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 FAM49AQ9H0Q0 323 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 NKX2-4Q9H2Z4 354 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 SH2B1Q9NRF2 756 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 SAMM50Q9Y512 469 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 PCDHA2Q9Y5H9 948 aa11.57□□□□□ -0.56
GTF3C1-213ENST00000571886 WDR64B1ANS9 1081 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 ARHGEF15O94989 841 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 ACTN1P12814 892 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 ATP2A2P16615 1042 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 WDR5P61964 334 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 TMEM62Q0P6H9 643 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 GRIN2CQ14957 1233 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 CKAP2LQ8IYA6 745 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 SMAP1Q8IYB5 467 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 TIFAQ96CG3 184 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 TMX3Q96JJ7 454 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 C8orf76Q96K31 380 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 CDHR5Q9HBB8 845 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 KCNMB3Q9NPA1 279 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 VAV3Q9UKW4 847 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 CDY2AQ9Y6F7 541 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 IGSF9BQ9UPX0 1349 aa11.56□□□□□ -0.56
GTF3C1-213ENST00000571886 TMEM150BA6NC51 233 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 KIF28PB7ZC32 967 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 CAND2O75155 1236 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 PARNO95453 639 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 GHRP10912 638 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 SLC26A2P50443 739 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 TRIM29Q14134 588 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 TAF2Q6P1X5 1199 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 MIER3Q7Z3K6 550 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 SPRED2Q7Z698 418 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 KIAA0319LQ8IZA0 1049 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 CDX2Q99626 313 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 SH2D3AQ9BRG2 576 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 MTIF3Q9H2K0 278 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 ZNF576Q9H609 170 aa11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 AGO3Q9H9G7 860 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-213ENST00000571886 ABHD14A-ACY1A0A1B0GW23 586 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 ST18O60284 1047 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 BAIAP3O94812 1187 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 C22orf31O95567 290 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 GCFC2P16383 781 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 ATP2B1P20020 1258 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 SFNP31947 248 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 JAK3P52333 1124 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 MRPS6P82932 125 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 HMGN5P82970 282 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 PRKCEQ02156 737 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 IKBKEQ14164 716 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 LPIN1Q14693 890 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 ZNF484Q5JVG2 852 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 HERC6Q8IVU3 1022 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 BANK1Q8NDB2 785 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 FBXO18Q8NFZ0 1043 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 MYLIPQ8WY64 445 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 FAM20AQ96MK3 541 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 PPP1R16BQ96T49 567 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 SLC9A7Q96T83 725 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 TMEM60Q9H2L4 133 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 BRMS1Q9HCU9 246 aa11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 WRAP73Q9P2S5 460 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-213ENST00000571886 SMIM35A0A1B0GVV1 85 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 LCHNA4D1U4 455 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 OATP04181 439 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 SPIRE1Q08AE8 756 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 PPP2R5CQ13362 524 aa11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 TARBP2Q15633 366 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-213ENST00000571886 FBXO47Q5MNV8 452 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms