RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 POTEB3A0JP26 581 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 MBLAC1A4D2B0 266 aaPredicted RBP7.87□□□□□ -1.15
SMG6-209ENST00000571442 PSAPP07602 524 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 OR52Z1P0C646 297 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 IQCF3P0C7M6 154 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 CKBP12277 381 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 PRKCEQ02156 737 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 GRIN1Q05586 938 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 PTK7Q13308 1070 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 GNL2Q13823 731 aaKnown RBP7.87□□□□□ -1.15
SMG6-209ENST00000571442 CTTNQ14247 550 aaKnown RBP7.87□□□□□ -1.15
SMG6-209ENST00000571442 ECM1Q16610 540 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 ZNF618Q5T7W0 954 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 FOXD4L5Q5VV16 416 aaPredicted RBP7.87□□□□□ -1.15
SMG6-209ENST00000571442 NCAPH2Q6IBW4 605 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 MFSD5Q6N075 450 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 POTEBQ6S5H4 581 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 ATP8B4Q8TF62 1192 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 FOXD4L4Q8WXT5 416 aaPredicted RBP7.87□□□□□ -1.15
SMG6-209ENST00000571442 ATP6V0A1Q93050 837 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 DYDC2Q96IM9 177 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 CHAMP1Q96JM3 812 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 AZI2Q9H6S1 392 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
SMG6-209ENST00000571442 ZNF215Q9UL58 517 aaPredicted RBP7.87□□□□□ -1.15
SMG6-209ENST00000571442 TRPC6Q9Y210 931 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 ZDHHC9Q9Y397 364 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 SAMM50Q9Y512 469 aa7.87□□□□□ -1.15
SMG6-209ENST00000571442 NRCAMQ92823 1304 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 PP2D1A8MPX8 630 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 SOX1O00570 391 aaPredicted RBP7.86□□□□□ -1.15
SMG6-209ENST00000571442 STX6O43752 255 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 HBP1O60381 514 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 NBNO60934 754 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 MED24O75448 989 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 SLITRK3O94933 977 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 C22orf31O95567 290 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 OATP04181 439 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 CTSHP09668 335 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 SPATA31C1P0DKV0 1188 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 SFNP31947 248 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 TECP42680 631 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 TRAPPC10P48553 1259 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 JAK3P52333 1124 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 NPEPPSP55786 919 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 CYP4A11Q02928 519 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 RBL2Q08999 1139 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 MGAT3Q09327 533 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 PTGDRQ13258 359 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 DRP2Q13474 957 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 EPHA7Q15375 998 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 SHHQ15465 462 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 TARBP2Q15633 366 aaKnown RBP7.86□□□□□ -1.15
SMG6-209ENST00000571442 FAM160B1Q5W0V3 765 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 PLA2G4FQ68DD2 849 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 MTHFD1LQ6UB35 978 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 ANO5Q75V66 913 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 LINC01465Q8N7H1 131 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 RDM1Q8NG50 284 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 DNAJB3Q8WWF6 145 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 LRCH3Q96II8 777 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 NAP1L4Q99733 375 aaKnown RBP7.86□□□□□ -1.15
SMG6-209ENST00000571442 HSD17B14Q9BPX1 270 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 EIF2AK1Q9BQI3 630 aaKnown RBP7.86□□□□□ -1.15
SMG6-209ENST00000571442 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.86□□□□□ -1.158e-7■■■■■ 32.7
SMG6-209ENST00000571442 LXNQ9BS40 222 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 SEZ6LQ9BYH1 1024 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 PRKAG2Q9UGJ0 569 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 TUBE1Q9UJT0 475 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 PCDHA12Q9UN75 941 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 KIF3AQ9Y496 699 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 CLIC4Q9Y696 253 aa7.86□□□□□ -1.15
SMG6-209ENST00000571442 PITPNM1O00562 1244 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 CHRNA1P02708 482 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 KLRC1P26715 233 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 CDC25AP30304 524 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 BMP8BP34820 402 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 THPOP40225 353 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 ATP2C1P98194 919 aaPredicted RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 FPGSQ05932 587 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 TMEM62Q0P6H9 643 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 MKRN4PQ13434 485 aaPredicted RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 PTPAQ15257 358 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 TMEM240Q5SV17 173 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 FAM109BQ6ICB4 259 aaPredicted RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 ZNF365Q70YC5 407 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 LRRC8DQ7L1W4 858 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 DEFB128Q7Z7B8 93 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 CKAP2LQ8IYA6 745 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 SLFN12Q8IYM2 578 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 LRRC71Q8N4P6 559 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 LRRC15Q8TF66 581 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 BBXQ8WY36 941 aaPredicted RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 USP28Q96RU2 1077 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 PPP1R16BQ96T49 567 aa7.85□□□□□ -1.15
SMG6-209ENST00000571442 LBHD1Q9BQE6 289 aaPredicted RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 MMTAG2Q9BU76 263 aaKnown RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 UBE2OQ9C0C9 1292 aaKnown RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 FAM49AQ9H0Q0 323 aaPredicted RBP7.85□□□□□ -1.15
SMG6-209ENST00000571442 CDHR5Q9HBB8 845 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms