RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SMAD2Q15796 467 aaKnown RBP15.12■□□□□ 0.01
CCDC40-205ENST00000571028 RNF135Q8IUD6 432 aa15.12■□□□□ 0.01
CCDC40-205ENST00000571028 OXER1Q8TDS5 423 aa15.12■□□□□ 0.01
CCDC40-205ENST00000571028 SEPT8Q92599 483 aa15.12■□□□□ 0.01
CCDC40-205ENST00000571028 PBXIP1Q96AQ6 731 aa15.12■□□□□ 0.01
CCDC40-205ENST00000571028 BRMS1Q9HCU9 246 aa15.12■□□□□ 0.01
CCDC40-205ENST00000571028 MRVI1Q9Y6F6 885 aa15.12■□□□□ 0.01
CCDC40-205ENST00000571028 SORBS3O60504 671 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 F2P00734 622 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 FOSP01100 380 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-205ENST00000571028 CTNNB1P35222 781 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 KRT2P35908 639 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 ZNF76P36508 570 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 CLK2P49760 499 aaKnown RBP15.11■□□□□ 0.01
CCDC40-205ENST00000571028 AP3B2Q13367 1082 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 CUL4AQ13619 759 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 LAMC2Q13753 1193 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 GNL2Q13823 731 aaKnown RBP15.11■□□□□ 0.01
CCDC40-205ENST00000571028 COL19A1Q14993 1142 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 PRSS33Q8NF86 280 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 EDAQ92838 391 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 IFIH1Q9BYX4 1025 aaKnown RBP15.11■□□□□ 0.01
CCDC40-205ENST00000571028 KIF3AQ9Y496 699 aa15.11■□□□□ 0.01
CCDC40-205ENST00000571028 CCDC194A0A1B0GVG4 234 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 BTBD18B2RXH4 712 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 EIF3JO75822 258 aaKnown RBP15.1■□□□□ 0.01
CCDC40-205ENST00000571028 MMP1P03956 469 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 ZNF200P98182 395 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-205ENST00000571028 NR5A1Q13285 461 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 SMAD4Q13485 552 aaKnown RBP15.1■□□□□ 0.01
CCDC40-205ENST00000571028 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC40-205ENST00000571028 NPY5RQ15761 445 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 TRIM71Q2Q1W2 868 aaKnown RBP15.1■□□□□ 0.01
CCDC40-205ENST00000571028 PLEKHG4Q58EX7 1191 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 GALNT17Q6IS24 598 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 TRAF7Q6Q0C0 670 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 VSIG10LQ86VR7 867 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 DIS3L2Q8IYB7 885 aaKnown RBP15.1■□□□□ 0.01
CCDC40-205ENST00000571028 DAGLBQ8NCG7 672 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 PPTC7Q8NI37 304 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 WNT8BQ93098 351 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 C11orf84Q9BUA3 381 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-205ENST00000571028 PKD2L1Q9P0L9 805 aa15.1■□□□□ 0.01
CCDC40-205ENST00000571028 TMEM221A6NGB7 291 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 H3BQV1 296 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 M0R296 226 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 MBTPS2O43462 519 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 GFRA3O60609 400 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 CSPG5O95196 566 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 MRPS9P82933 396 aaKnown RBP15.09■□□□□ 0.01
CCDC40-205ENST00000571028 ARHGAP4P98171 946 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 FOXK2Q01167 660 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 INF2Q27J81 1249 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 PCNX4Q63HM2 1172 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 LARP1BQ659C4 914 aaKnown RBP15.09■□□□□ 0.01
CCDC40-205ENST00000571028 MCTP1Q6DN14 999 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 PIK3AP1Q6ZUJ8 805 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 FIBCD1Q8N539 461 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 TOP1MTQ969P6 601 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 EMID1Q96A84 441 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-205ENST00000571028 LMAN2LQ9H0V9 348 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 IGFLR1Q9H665 355 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 CD207Q9UJ71 328 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 DDX41Q9UJV9 622 aaKnown RBP15.09■□□□□ 0.01
CCDC40-205ENST00000571028 RWDD3Q9Y3V2 267 aa15.09■□□□□ 0.01
CCDC40-205ENST00000571028 C17orf102A2RUQ5 167 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 FAM205CA6NFA0 338 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 RGS20O76081 388 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 ATP2B1P20020 1258 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 LTBRP36941 435 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 NDUFV1P49821 464 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 NONOQ15233 471 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC40-205ENST00000571028 IER5LQ5T953 404 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 MCTP2Q6DN12 878 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 TRIM67Q6ZTA4 783 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 KRT25Q7Z3Z0 450 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 BMP8AQ7Z5Y6 402 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 NLRX1Q86UT6 975 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 SERINC5Q86VE9 423 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 TBCKQ8TEA7 893 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 ATP6V0A1Q93050 837 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 PPP2R3CQ969Q6 453 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 FRMPD4Q14CM0 1322 aa15.08■□□□□ 0
CCDC40-205ENST00000571028 VPS37CA5D8V6 355 aaPredicted RBP15.07■□□□□ 0
CCDC40-205ENST00000571028 HAS3O00219 553 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 RB1P06400 928 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 CTSHP09668 335 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 SREBF1P36956 1147 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 HYAL1Q12794 435 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
CCDC40-205ENST00000571028 CTC1Q2NKJ3 1217 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 GNPTABQ3T906 1256 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 EARS2Q5JPH6 523 aaKnown RBP15.07■□□□□ 0
CCDC40-205ENST00000571028 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
CCDC40-205ENST00000571028 FBXO18Q8NFZ0 1043 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 CYP2W1Q8TAV3 490 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 APBB2Q92870 758 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 SPATA33Q96N06 139 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 IRF2BPLQ9H1B7 796 aa15.07■□□□□ 0
CCDC40-205ENST00000571028 TRIP12Q14669 1992 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms