RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 LMTK2Q8IWU2 1503 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 UQCRHLA0A096LP55 91 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 KLF4O43474 513 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 SMARCA5O60264 1052 aaPredicted RBP4.69□□□□□ -1.66
CDC27-211ENST00000570740 UQCRHP07919 91 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 CCDC172P0C7W6 258 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 NEFHP12036 1026 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 LCP1P13796 627 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 SARSP49591 514 aaKnown RBP4.69□□□□□ -1.66
CDC27-211ENST00000570740 PPP2R2AP63151 447 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 MAP4K2Q12851 820 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 LSAMPQ13449 338 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 FAM50AQ14320 339 aaKnown RBP4.69□□□□□ -1.66
CDC27-211ENST00000570740 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 GGT6Q6P531 493 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 CD300LDQ6UXZ3 194 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 TTLL7Q6ZT98 887 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 ANKS3Q6ZW76 656 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 MILR1Q7Z6M3 343 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 FAM26EQ8N5C1 309 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 DRC1Q96MC2 740 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 PPP1R9BQ96SB3 815 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 NCAPGQ9BPX3 1015 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 C11orf84Q9BUA3 381 aaPredicted RBP4.69□□□□□ -1.66
CDC27-211ENST00000570740 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 GRPEL1Q9HAV7 217 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 ST7Q9NRC1 585 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 USP40Q9NVE5 1235 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 NTMQ9P121 344 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 ZNF652Q9Y2D9 606 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 COA3Q9Y2R0 106 aaPredicted RBP4.69□□□□□ -1.66
CDC27-211ENST00000570740 ANKRD50Q9ULJ7 1429 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 PZPP20742 1482 aa4.69□□□□□ -1.66
CDC27-211ENST00000570740 TULP2O00295 520 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 GOLIM4O00461 696 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 PRICKLE3O43900 615 aaPredicted RBP4.68□□□□□ -1.66
CDC27-211ENST00000570740 NOBOXO60393 691 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 CELA3BP08861 270 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 GRIA2P42262 883 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 GTF2A1P52655 376 aaPredicted RBP4.68□□□□□ -1.66
CDC27-211ENST00000570740 TRDNQ13061 729 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 SMAD4Q13485 552 aaKnown RBP4.68□□□□□ -1.66
CDC27-211ENST00000570740 CHRNA2Q15822 529 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 NBPF6Q5VWK0 638 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 ZC3H18Q86VM9 953 aaKnown RBP4.68□□□□□ -1.66
CDC27-211ENST00000570740 NBPF5PQ86XG9 351 aaPredicted RBP4.68□□□□□ -1.66
CDC27-211ENST00000570740 FAM126BQ8IXS8 530 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 KYQ8NBH2 561 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 NBPF4Q96M43 638 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 FAM210AQ96ND0 272 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 SYT3Q9BQG1 590 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 NGRNQ9NPE2 291 aaKnown RBP4.68□□□□□ -1.66
CDC27-211ENST00000570740 OGFRQ9NZT2 677 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 PCDHA2Q9Y5H9 948 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 PTPRKQ15262 1439 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 UHRF1BP1Q6BDS2 1440 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 VWDEQ8N2E2 1590 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 RPRD2Q5VT52 1461 aaKnown RBP4.68□□□□□ -1.66
CDC27-211ENST00000570740 NLRP1Q9C000 1473 aa4.68□□□□□ -1.66
CDC27-211ENST00000570740 KDM5AP29375 1690 aaKnown RBP4.67□□□□□ -1.66
CDC27-211ENST00000570740 CLTCQ00610 1675 aaKnown RBP4.67□□□□□ -1.66
CDC27-211ENST00000570740 HGSO14964 777 aaPredicted RBP4.67□□□□□ -1.66
CDC27-211ENST00000570740 TADA3O75528 432 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 ZNF853P0CG23 659 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 RPL13P26373 211 aaKnown RBP4.67□□□□□ -1.66
CDC27-211ENST00000570740 THBS2P35442 1172 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 ITGA1P56199 1179 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 RTP5Q14D33 572 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 CR1LQ2VPA4 569 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 EMC4Q5J8M3 183 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 ZNF761Q86XN6 746 aaPredicted RBP4.67□□□□□ -1.66
CDC27-211ENST00000570740 OTUD6BQ8N6M0 293 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 TTLL6Q8N841 843 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 ADAMTS17Q8TE56 1095 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 KCTD13Q8WZ19 329 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 SGSM3Q96HU1 749 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 CHAMP1Q96JM3 812 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 IER2Q9BTL4 223 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 LNPKQ9C0E8 428 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 RRP7BPQ9NSQ0 103 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 SLC52A1Q9NWF4 448 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 CLDND1Q9NY35 253 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 SH3BP1Q9Y3L3 701 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 PLA2R1Q13018 1463 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 LMTK3Q96Q04 1460 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 ZNF142P52746 1687 aaPredicted RBP4.67□□□□□ -1.66
CDC27-211ENST00000570740 ABCC3O15438 1527 aa4.67□□□□□ -1.66
CDC27-211ENST00000570740 SPATA31D1Q6ZQQ2 1576 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 SMG6Q86US8 1419 aaKnown RBP4.66□□□□□ -1.66
CDC27-211ENST00000570740 MROH1Q8NDA8 1641 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 TCRBV5S2A0A599 114 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 DLX3O60479 287 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 STAT5AP42229 794 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 GJA9P57773 515 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 HDAC1Q13547 482 aaPredicted RBP4.66□□□□□ -1.66
CDC27-211ENST00000570740 HSP90AB4PQ58FF6 505 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 PRR31Q5SQ13 230 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 STEAP3Q658P3 488 aa4.66□□□□□ -1.66
CDC27-211ENST00000570740 THEMISQ8N1K5 641 aaPredicted RBP4.66□□□□□ -1.66
CDC27-211ENST00000570740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms