RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 MLXIPQ9HAP2 919 aa8.39□□□□□ -1.07
SMG6-205ENST00000570659 TYW1Q9NV66 732 aaKnown RBP8.39□□□□□ -1.07
SMG6-205ENST00000570659 TMEM260Q9NX78 707 aa8.39□□□□□ -1.07
SMG6-205ENST00000570659 RWDD3Q9Y3V2 267 aa8.39□□□□□ -1.07
SMG6-205ENST00000570659 HCFC2Q9Y5Z7 792 aa8.39□□□□□ -1.07
SMG6-205ENST00000570659 FRMPD4Q14CM0 1322 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 TBKBP1A7MCY6 615 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 HMMRO75330 724 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 SCG2P13521 617 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 EPCAMP16422 314 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 NUBP1P53384 320 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 IGBP1P78318 339 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 RARS2Q5T160 578 aaKnown RBP8.38□□□□□ -1.07
SMG6-205ENST00000570659 ENAHQ8N8S7 591 aaPredicted RBP8.38□□□□□ -1.07
SMG6-205ENST00000570659 SUMF1Q8NBK3 374 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 BCL7CQ8WUZ0 217 aaPredicted RBP8.38□□□□□ -1.07
SMG6-205ENST00000570659 PPP1R16BQ96T49 567 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 MPHOSPH6Q99547 160 aaKnown RBP8.38□□□□□ -1.07
SMG6-205ENST00000570659 TCF25Q9BQ70 676 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 IRF2BPLQ9H1B7 796 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 DCTPP1Q9H773 170 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
SMG6-205ENST00000570659 NOC2LQ9Y3T9 749 aaKnown RBP8.38□□□□□ -1.07
SMG6-205ENST00000570659 IGSF9BQ9UPX0 1349 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 SPEGQ15772 3267 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 B4GALT3O60512 393 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
SMG6-205ENST00000570659 TCF7P36402 384 aaPredicted RBP8.37□□□□□ -1.07
SMG6-205ENST00000570659 CLCN5P51795 746 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 PPFIA1Q13136 1202 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 NMIQ13287 307 aaPredicted RBP8.37□□□□□ -1.07
SMG6-205ENST00000570659 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
SMG6-205ENST00000570659 NAALADL2Q58DX5 795 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 MCTP2Q6DN12 878 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 METTL7BQ6UX53 244 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 UBALD2Q8IYN6 164 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 MIER1Q8N108 512 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 SIX5Q8N196 739 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 CYP2W1Q8TAV3 490 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 RASGRP4Q8TDF6 673 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 PIGSQ96S52 555 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 VN1R3Q9BXE9 311 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 IL25Q9H293 177 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 ADAM7Q9H2U9 754 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 DLGAP2Q9P1A6 1054 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 MAD2L2Q9UI95 211 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 TUBE1Q9UJT0 475 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 MRPL11Q9Y3B7 192 aaKnown RBP8.37□□□□□ -1.07
SMG6-205ENST00000570659 TAF6LQ9Y6J9 622 aa8.37□□□□□ -1.07
SMG6-205ENST00000570659 DOCK8Q8NF50 2099 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 DOCK6Q96HP0 2047 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 ATRXP46100 2492 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 DCDC2BA2VCK2 349 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 C2orf71A6NGG8 1288 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 B4DLN1 442 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 B4E1Z4 1266 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 C9IYK1 514 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 NT5C1B-RDH14C9J2C7 533 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 NOP56O00567 594 aaKnown RBP8.36□□□□□ -1.07
SMG6-205ENST00000570659 LMNAP02545 664 aaKnown RBP8.36□□□□□ -1.07
SMG6-205ENST00000570659 DCNP07585 359 aaKnown RBP8.36□□□□□ -1.07
SMG6-205ENST00000570659 INSRRP14616 1297 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 KCNA2P16389 499 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 TGM1P22735 817 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 PDE4AP27815 886 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 MRPL12P52815 198 aaKnown RBP8.36□□□□□ -1.07
SMG6-205ENST00000570659 ATXN1P54253 815 aaKnown RBP8.36□□□□□ -1.07
SMG6-205ENST00000570659 COL9A2Q14055 689 aaPredicted RBP8.36□□□□□ -1.07
SMG6-205ENST00000570659 GPATCH4Q5T3I0 446 aaKnown RBP8.36□□□□□ -1.07
SMG6-205ENST00000570659 MCF2L2Q86YR7 1114 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 THNSL1Q8IYQ7 743 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 KCNG4Q8TDN1 519 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 CASD1Q96PB1 797 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 USP26Q9BXU7 913 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 PCDHA1Q9Y5I3 950 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 EVPLQ92817 2033 aa8.36□□□□□ -1.07
SMG6-205ENST00000570659 ZZEF1O43149 2961 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 ZFYVE26Q68DK2 2539 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 DHX16O60231 1041 aaKnown RBP8.35□□□□□ -1.07
SMG6-205ENST00000570659 SP9P0CG40 484 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 MYBP10242 640 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 TGFB3P10600 412 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 ITGB5P18084 799 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 CCND2P30279 289 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 SARSP49591 514 aaKnown RBP8.35□□□□□ -1.07
SMG6-205ENST00000570659 DSC3Q14574 896 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 PUM1Q14671 1186 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG6-205ENST00000570659 PLCB4Q15147 1175 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 CLLU1OSQ5K130 101 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 PPP4R3BQ5MIZ7 849 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 USP17L6PQ6QN14 398 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 TMC5Q6UXY8 1006 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 CYB5R4Q7L1T6 521 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 SLC22A17Q8WUG5 538 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 PIBF1Q8WXW3 757 aa8.35□□□□□ -1.07
SMG6-205ENST00000570659 MRPS27Q92552 414 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms