RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CD99L2Q8TCZ2 262 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 NHSQ6T4R5 1651 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 BAIAP3O94812 1187 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 IL1R1P14778 569 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 KRT72Q14CN4 511 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 RABEP1Q15276 862 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 ARMC4Q5T2S8 1044 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 GPATCH4Q5T3I0 446 aaKnown RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 SWT1Q5T5J6 900 aaKnown RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 CCDC102BQ68D86 513 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 BICD2Q8TD16 824 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 CRACR2AQ9BSW2 395 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 AGTPBP1Q9UPW5 1226 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 MROH7-TTC4A0A0A0MT08 1334 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 PDS5AQ29RF7 1337 aaKnown RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 ARHGEF37A1IGU5 675 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 PPP1R3GB7ZBB8 358 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 NKRFO15226 690 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMG1-217ENST00000569764 TLR2O60603 784 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 CYP2E1P05181 493 aaPredicted RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 MYBL2P10244 700 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 MCM4P33991 863 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RACK1P63244 317 aaKnown RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 EXOSC10Q01780 885 aaKnown RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 HOOK3Q86VS8 718 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RASAL3Q86YV0 1011 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 ABI1Q8IZP0 508 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 GBP7Q8N8V2 638 aaPredicted RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 SLC17A8Q8NDX2 589 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 CHST13Q8NET6 341 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TMX3Q96JJ7 454 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 MFRPQ9BY79 579 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TNMDQ9H2S6 317 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 SEPT10Q9P0V9 454 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 KIAA1468Q9P260 1216 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 LIMD1Q9UGP4 676 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 FEM1BQ9UK73 627 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 FBXO10Q9UK96 956 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TRAF5O00463 557 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 GUCY2CP25092 1073 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 VARSP26640 1264 aaKnown RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 TM4SF4P48230 202 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 SEPHS1P49903 392 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 PDE6CP51160 858 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 NUCB2P80303 420 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 NECTIN1Q15223 517 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RBM20Q5T481 1227 aaKnown RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 C3orf67Q6ZVT6 689 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 MAPKAPK5Q8IW41 473 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TCEANC2Q96MN5 208 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TTC14Q96N46 770 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RAB34Q9BZG1 259 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 DISC1Q9NRI5 854 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 SPATA7Q9P0W8 599 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 SPDYE3A6NKU9 549 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 FOXP2O15409 715 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 CYP1A2P05177 515 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 CSF1RP07333 972 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RPL17P18621 184 aaKnown RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 TPP2P29144 1249 aaPredicted RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 SERPINB3P29508 390 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 VWA3BQ502W6 1294 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 SWSAP1Q6NVH7 229 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 HIBCHQ6NVY1 386 aaPredicted RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 LVRNQ6Q4G3 990 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 DDX42Q86XP3 938 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMG1-217ENST00000569764 ZBTB10Q96DT7 871 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 C11orf49Q9H6J7 331 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 DDX41Q9UJV9 622 aaKnown RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 JAG2Q9Y219 1238 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TACC3Q9Y6A5 838 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 BTAF1O14981 1849 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 SBF2Q86WG5 1849 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RPTORQ8N122 1335 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 AOC2O75106 756 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 CENPAP49450 140 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 PLIN5Q00G26 463 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 SMC1AQ14683 1233 aaKnown RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 PSRC1Q6PGN9 363 aaPredicted RBP7.3□□□□□ -1.24
SMG1-217ENST00000569764 SEPT14Q6ZU15 432 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RUFY3Q7L099 469 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 MIGA2Q7L4E1 593 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TRPM4Q8TD43 1214 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 TMEM39AQ9NV64 488 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 RTEL1Q9NZ71 1219 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 POLLQ9UGP5 575 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 MRFAP1Q9Y605 127 aa7.3□□□□□ -1.24
SMG1-217ENST00000569764 PFASO15067 1338 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 A0A1W2PPC1 479 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 AKAP10O43572 662 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 TBCAO75347 108 aaKnown RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 RDXP35241 583 aaKnown RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 ANKRD1Q15327 319 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 MAJINQ3KP22 176 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 GBP6Q6ZN66 633 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 LRRC43Q8N309 656 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 SHCBP1Q8NEM2 672 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms