RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	RAD17	O75943	681 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	NAT1	P18440	290 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	ACRV1	P26436	265 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	GRIN1	Q05586	938 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	FSTL1	Q12841	308 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	SKIDA1	Q1XH10	827 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	NBPF6	Q5VWK0	638 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	NLGN4X	Q8N0W4	816 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	FAM89A	Q96GI7	184 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	NBPF4	Q96M43	638 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	ARHGAP20	Q9P2F6	1191 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	MSRB2	Q9Y3D2	182 aa		5.45	□□□□□ -1.54
UBR1-209	ENST00000569243	ZNF839	A8K0R7	811 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	AQP7	O14520	342 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	NKRF	O15226	690 aa	Known RBP eCLIP	5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	CUTA	O60888	179 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	PFKP	Q01813	784 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	PHF19	Q5T6S3	580 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	KCNT2	Q6UVM3	1135 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	DPP8	Q6V1X1	898 aa	Predicted RBP	5.44	□□□□□ -1.54
UBR1-209	ENST00000569243		Q6ZPA2	131 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	POLN	Q7Z5Q5	900 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	ULK2	Q8IYT8	1036 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	MSL2	Q9HCI7	577 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	IGSF5	Q9NSI5	407 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	RBPJL	Q9UBG7	517 aa		5.44	□□□□□ -1.54
UBR1-209	ENST00000569243	MASP2	O00187	686 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	FOXN1	O15353	648 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	COL6A2	P12110	1019 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	CSF2RB	P32927	897 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	PAK1	Q13153	545 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	LONRF2	Q1L5Z9	754 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	MAMDC4	Q6UXC1	1216 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	PTPRN2	Q92932	1015 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	KCNJ15	Q99712	375 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	SPATA9	Q9BWV2	254 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	TRIM55	Q9BYV6	548 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	CCDC113	Q9H0I3	377 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	ZFP69B	Q9UJL9	534 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243	TELO2	Q9Y4R8	837 aa		5.43	□□□□□ -1.54
UBR1-209	ENST00000569243		H0Y858	1186 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	ACOT7	O00154	380 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	GJA4	P35212	333 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	DBP	Q10586	325 aa	Predicted RBP	5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	RASGRF1	Q13972	1273 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	CXXC5	Q7LFL8	322 aa	Known RBP	5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	CKAP2L	Q8IYA6	745 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	SLC2A4RG	Q9NR83	387 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	PTGFRN	Q9P2B2	879 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	PTPN22	Q9Y2R2	807 aa		5.42	□□□□□ -1.54
UBR1-209	ENST00000569243	GSTA4	O15217	222 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	NUDT3	O95989	172 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	LTF	P02788	710 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	POLD1	P28340	1107 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	ADRA1B	P35368	520 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	RAC3	P60763	192 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	USP10	Q14694	798 aa	Known RBP	5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	GPR19	Q15760	415 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	RBM12B	Q8IXT5	1001 aa	Known RBP	5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	STPG3	Q8N7X2	389 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	ZNF764	Q96H86	408 aa	Predicted RBP	5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	OR14A2	Q96R54	314 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	CARD11	Q9BXL7	1154 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	IPPK	Q9H8X2	491 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	SRPK3	Q9UPE1	567 aa		5.41	□□□□□ -1.54
UBR1-209	ENST00000569243	ASXL2	Q76L83	1435 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	PDPK1	O15530	556 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	ADCY3	O60266	1144 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	STK10	O94804	968 aa	Known RBP	5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	IL18BP	O95998	194 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	SUMO1	P63165	101 aa	Known RBP	5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	C16orf59	Q7L2K0	433 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	SH3RF2	Q8TEC5	729 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	FBXW5	Q969U6	566 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	SCYL1	Q96KG9	808 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	IPO9	Q96P70	1041 aa	Known RBP	5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	ADARB2	Q9NS39	739 aa	Known RBP	5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	FBXO10	Q9UK96	956 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	SLC30A1	Q9Y6M5	507 aa		5.4	□□□□□ -1.54
UBR1-209	ENST00000569243	TCRBV5S4A2T	A0A5A2	114 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	PTPN1	P18031	435 aa	Known RBP	5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	GLRB	P48167	497 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	C21orf58	P58505	322 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	HERVK_113	P62684	666 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	GABRE	P78334	506 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	ZNF568	Q3ZCX4	644 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	ZMAT1	Q5H9K5	638 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	FIGN	Q5HY92	759 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	EPHA10	Q5JZY3	1008 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	BTBD8	Q5XKL5	378 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	LAIR1	Q6GTX8	287 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	ARHGAP36	Q6ZRI8	547 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	LRP10	Q7Z4F1	713 aa		5.39	□□□□□ -1.55
UBR1-209	ENST00000569243	TRBV23-1	A0A0A0MS06	115 aa		5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms