RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	FAM26D	Q5JW98	314 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	MOXD1	Q6UVY6	613 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	NEK8	Q86SG6	692 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	NECAB1	Q8N987	351 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	GTF3C6	Q969F1	213 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	RAD9A	Q99638	391 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	PHF20	Q9BVI0	1012 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	PRDM12	Q9H4Q4	367 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	DISC1	Q9NRI5	854 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	RNF216	Q9NWF9	866 aa	Predicted RBP	11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	DDX25	Q9UHL0	483 aa	Known RBP	11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	KCNJ14	Q9UNX9	436 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	LIMCH1	Q9UPQ0	1083 aa		11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	YBX2	Q9Y2T7	364 aa	Known RBP	11.71	□□□□□ -0.53
UBR1-207	ENST00000568782	IGKV6D-21	A0A0A0MT36	114 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	SMIM35	A0A1B0GVV1	85 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	MSH4	O15457	936 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	MAGEB2	O15479	319 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	DHX15	O43143	795 aa	Known RBP	11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	CHMP2A	O43633	222 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	CCNT1	O60563	726 aa	Known RBP	11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	DKC1	O60832	514 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	GJB5	O95377	273 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	CCNE2	O96020	404 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	MYOG	P15173	224 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	MRPS6	P82932	125 aa	Known RBP	11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	GPNMB	Q14956	572 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	ME3	Q16798	604 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	INF2	Q27J81	1249 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	FAM117B	Q6P1L5	589 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	MTHFD1L	Q6UB35	978 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	MIER3	Q7Z3K6	550 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	ZNF710	Q8N1W2	664 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	METTL13	Q8N6R0	699 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	IL27	Q8NEV9	243 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	RDM1	Q8NG50	284 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	VWCE	Q96DN2	955 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	IL17RA	Q96F46	866 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	AIFM3	Q96NN9	605 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	YME1L1	Q96TA2	773 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	PCYT2	Q99447	389 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	FTHL17	Q9BXU8	183 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	GABBR1	Q9UBS5	961 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	TRPV2	Q9Y5S1	764 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	CDY2A	Q9Y6F7	541 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	SQOR	Q9Y6N5	450 aa		11.7	□□□□□ -0.54
UBR1-207	ENST00000568782	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	ST18	O60284	1047 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	UPP2	O95045	317 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	SEC24B	O95487	1268 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	CHRNA1	P02708	482 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	GHR	P10912	638 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	CYP3A7	P24462	503 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	DEFB103A	P81534	67 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	GNL2	Q13823	731 aa	Known RBP	11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	MBTPS1	Q14703	1052 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	MARCH8	Q5T0T0	291 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	TRAF7	Q6Q0C0	670 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	RUFY4	Q6ZNE9	571 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	TSHZ1	Q6ZSZ6	1077 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	PIK3AP1	Q6ZUJ8	805 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	FAM184A	Q8NB25	1140 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	PPM1E	Q8WY54	764 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	ARNTL2	Q8WYA1	636 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	SLC5A5	Q92911	643 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	FAM20A	Q96MK3	541 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	MAP7D2	Q96T17	732 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	CELF4	Q9BZC1	486 aa	Known RBP	11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	GINS2	Q9Y248	185 aa		11.69	□□□□□ -0.54
UBR1-207	ENST00000568782	PTPRS	Q13332	1948 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	ADAMTS3	O15072	1205 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	TDP2	O95551	362 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	DNM2	P50570	870 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	HMGN5	P82970	282 aa	Known RBP	11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	TMEM62	Q0P6H9	643 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	PAK2	Q13177	524 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	PPP4R3A	Q6IN85	833 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	SLFN12	Q8IYM2	578 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	TRAPPC12	Q8WVT3	735 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	SCLT1	Q96NL6	688 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	TGS1	Q96RS0	853 aa	Known RBP	11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	LLPH	Q9BRT6	129 aa	Known RBP	11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	CERS4	Q9HA82	394 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.68	□□□□□ -0.54
UBR1-207	ENST00000568782	KIF3A	Q9Y496	699 aa		11.68	□□□□□ -0.54
UBR1-207	ENST00000568782		M0R2N6	131 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	TBX3	O15119	743 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	GPR182	O15218	404 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	OAT	P04181	439 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	STAG3L1	P0CL83	205 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	CDC42EP1	Q00587	391 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	TAP1	Q03518	808 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	TBC1D8B	Q0IIM8	1120 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	NFX1	Q12986	1120 aa	Known RBP	11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	FBXO47	Q5MNV8	452 aa		11.67	□□□□□ -0.54

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