RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	IGBP1	P78318	339 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	SMAD3	P84022	425 aa	Known RBP	13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	GNL2	Q13823	731 aa	Known RBP	13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	MBTPS1	Q14703	1052 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	LRCH2	Q5VUJ6	765 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	LARP1B	Q659C4	914 aa	Known RBP	13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	GPR153	Q6NV75	609 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	PDXDC2P	Q6P474	469 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	POTEB	Q6S5H4	581 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	RUFY4	Q6ZNE9	571 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	ZBTB10	Q96DT7	871 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	C8orf76	Q96K31	380 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	TEKT3	Q9BXF9	490 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	UNC45A	Q9H3U1	944 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	GABBR1	Q9UBS5	961 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	TRPC6	Q9Y210	931 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	SAMM50	Q9Y512	469 aa		13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAPER-219	ENST00000568382	GRXCR1	A8MXD5	290 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	WDR64	B1ANS9	1081 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	RSPH10B2	B2RC85	870 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	CHMP2A	O43633	222 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	SLC34A2	O95436	690 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	PARN	O95453	639 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	CXCL10	P02778	98 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	RSPH10B	P0C881	870 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	GCFC2	P16383	781 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	TCTN1	Q2MV58	587 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	B3GNT9	Q6UX72	402 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	FBXO18	Q8NFZ0	1043 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	ATP8B4	Q8TF62	1192 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	TRAPPC12	Q8WVT3	735 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	HAS1	Q92839	578 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	TNPO1	Q92973	898 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	OSBPL7	Q9BZF2	842 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	KCNMB3	Q9NPA1	279 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	DISC1	Q9NRI5	854 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	TCEAL9	Q9UHQ7	104 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	TUBE1	Q9UJT0	475 aa		13.88	□□□□□ -0.19
SCAPER-219	ENST00000568382	WNT7A	O00755	349 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	HBP1	O60381	514 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	CAND2	O75155	1236 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	ACTN1	P12814	892 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	SFN	P31947	248 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	FAM26D	Q5JW98	314 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	TAF2	Q6P1X5	1199 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382		Q7L0L9	218 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	RPAIN	Q86UA6	219 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	DNAJB3	Q8WWF6	145 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	FAM20A	Q96MK3	541 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	IPO9	Q96P70	1041 aa	Known RBP	13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	NAP1L4	Q99733	375 aa	Known RBP	13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	MTIF3	Q9H2K0	278 aa	Known RBP	13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	LAMA3	Q16787	3333 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	GBF1	Q92538	1859 aa		13.87	□□□□□ -0.19
SCAPER-219	ENST00000568382	EVPL	Q92817	2033 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	ZBBX	A8MT70	800 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	ZBTB42	B2RXF5	422 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	TBX3	O15119	743 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	ZNF862	O60290	1169 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	CHRNA1	P02708	482 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	CTSH	P09668	335 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	KLRC1	P26715	233 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	JAK3	P52333	1124 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	UGCG	Q16739	394 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	ZNF484	Q5JVG2	852 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	MTHFD1L	Q6UB35	978 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	MIER3	Q7Z3K6	550 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	CKAP2L	Q8IYA6	745 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	BBX	Q8WY36	941 aa	Predicted RBP	13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	PCDHA2	Q9Y5H9	948 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	SLC4A7	Q9Y6M7	1214 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	IGSF9B	Q9UPX0	1349 aa		13.86	□□□□□ -0.19
SCAPER-219	ENST00000568382	SI	P14410	1827 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	EML1	O00423	815 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	PBX2	P40425	430 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	MGAT3	Q09327	533 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	PPP2R5C	Q13362	524 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	CNKSR3	Q6P9H4	555 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	DEFB123	Q8N688	67 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	SPRYD3	Q8NCJ5	442 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	RDM1	Q8NG50	284 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	FOXP1	Q9H334	677 aa	Predicted RBP	13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	VAV3	Q9UKW4	847 aa		13.85	□□□□□ -0.19
SCAPER-219	ENST00000568382	SZT2	Q5T011	3432 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	COL1A2	P08123	1366 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	PTPRS	Q13332	1948 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	LOXHD1	Q8IVV2	1947 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	SMIM35	A0A1B0GVV1	85 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	MARCH6	O60337	910 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	BAIAP3	O94812	1187 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	STBD1	O95210	358 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	PLEKHG4	Q58EX7	1191 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	RSPH3	Q86UC2	560 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	DBF4B	Q8NFT6	615 aa		13.84	□□□□□ -0.19
SCAPER-219	ENST00000568382	PBX4	Q9BYU1	374 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms