RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MYH11P35749 1972 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 FRMD3A2A2Y4 597 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 AKR1B15C9JRZ8 316 aaPredicted RBP7.81□□□□□ -1.16
SMG1-215ENST00000568239 BACH1O14867 736 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 NKRFO15226 690 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMG1-215ENST00000568239 MAFGO15525 162 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 NMT1P30419 496 aaKnown RBP7.81□□□□□ -1.16
SMG1-215ENST00000568239 ALDH5A1P51649 535 aaPredicted RBP7.81□□□□□ -1.16
SMG1-215ENST00000568239 JAK3P52333 1124 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 FKBP3Q00688 224 aaKnown RBP7.81□□□□□ -1.16
SMG1-215ENST00000568239 TBC1D8BQ0IIM8 1120 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 UGCGQ16739 394 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 ODR4Q5SWX8 454 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 C2orf69Q8N8R5 385 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 CDHR1Q96JP9 859 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 JPH1Q9HDC5 661 aaPredicted RBP7.81□□□□□ -1.16
SMG1-215ENST00000568239 GABBR1Q9UBS5 961 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 PCDHA10Q9Y5I2 948 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 CCL15-CCL14A0A0B4J2E2 113 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 MUTP22033 750 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 SFNP31947 248 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 NPEPPSP55786 919 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 PSMC5P62195 406 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 ADAM9Q13443 819 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 KCTD2Q14681 263 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 CCL15Q16663 113 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 ZC2HC1CQ53FD0 456 aaPredicted RBP7.81□□□□□ -1.16
SMG1-215ENST00000568239 XKR9Q5GH70 373 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 PLA2G4FQ68DD2 849 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 GPAT2Q6NUI2 795 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 SWSAP1Q6NVH7 229 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 CYFIP1Q7L576 1253 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 KSR1Q8IVT5 923 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 FAM178BQ8IXR5 827 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 KCTD17Q8N5Z5 321 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 IWS1Q96ST2 819 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 BAG1Q99933 345 aaPredicted RBP7.81□□□□□ -1.16
SMG1-215ENST00000568239 NMRK2Q9NPI5 230 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 SLC9A2Q9UBY0 812 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 TELO2Q9Y4R8 837 aa7.81□□□□□ -1.16
SMG1-215ENST00000568239 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMG1-215ENST00000568239 USP27XA6NNY8 438 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 LGALS16A8MUM7 142 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 PDHXO00330 501 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 HIP1RO75146 1068 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 EIF3JO75822 258 aaKnown RBP7.8□□□□□ -1.16
SMG1-215ENST00000568239 CNMDO75829 334 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 SLC25A27O95847 323 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 KCNA2P16389 499 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 RARRES1P49788 294 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 KCNA1Q09470 495 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 TBX2Q13207 712 aaPredicted RBP7.8□□□□□ -1.16
SMG1-215ENST00000568239 MOGSQ13724 837 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 KNOP1Q1ED39 458 aaKnown RBP7.8□□□□□ -1.16
SMG1-215ENST00000568239 FKBP15Q5T1M5 1219 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
SMG1-215ENST00000568239 ANKRD13CQ8N6S4 541 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 TC2NQ8N9U0 490 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 CCDC112Q8NEF3 446 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 UBE2Q2Q8WVN8 375 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 MMP19Q99542 508 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 PNMA3Q9UL41 463 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 R3HCC1Q9Y3T6 440 aaKnown RBP7.8□□□□□ -1.16
SMG1-215ENST00000568239 ASTN1O14525 1302 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 PAPPA2Q9BXP8 1791 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 CLIC2O15247 247 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 STAM2O75886 525 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 GAP43P17677 238 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 TRIM21P19474 475 aaKnown RBP7.8□□□□□ -1.16
SMG1-215ENST00000568239 NR2F2P24468 414 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 DNM2P50570 870 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 FXR1P51114 621 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMG1-215ENST00000568239 SP2Q02086 613 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 ZNF746Q6NUN9 644 aaPredicted RBP7.8□□□□□ -1.16
SMG1-215ENST00000568239 EFCC1Q9HA90 598 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 SOWAHBA6NEL2 793 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 CETN3O15182 167 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 OFD1O75665 1012 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 GYPCP04921 128 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 PSAPP07602 524 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 CETPP11597 493 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 PBX1P40424 430 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 KLK7P49862 253 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 ACTR2P61160 394 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 ERVK-9P63128 1117 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 ERVK-24P63145 666 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 SYCP1Q15431 976 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 FAM102BQ5T8I3 360 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 LRRC55Q6ZSA7 311 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 ZNF592Q92610 1267 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 CEP170P1Q96L14 293 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 IKZF4Q9H2S9 585 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 KCTD10Q9H3F6 313 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 SPTLC3Q9NUV7 552 aa7.8□□□□□ -1.16
SMG1-215ENST00000568239 LOC285556D6RIA3 1793 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 SPATA31C2B4DYI2 1134 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 BTBD19C9JJ37 291 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 KRT9P35527 623 aa7.79□□□□□ -1.16
SMG1-215ENST00000568239 GTF2A2P52657 109 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms