RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 PPARGC1AQ9UBK2 798 aaKnown RBP4.41□□□□□ -1.7
TCF4-239ENST00000568186 MRPS23Q9Y3D9 190 aaKnown RBP4.41□□□□□ -1.7
TCF4-239ENST00000568186 MRPL42Q9Y6G3 142 aaKnown RBP4.41□□□□□ -1.7
TCF4-239ENST00000568186 SLC4A7Q9Y6M7 1214 aa4.41□□□□□ -1.7
TCF4-239ENST00000568186 BLACEA4D250 179 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 C6orf222P0C671 652 aaPredicted RBP4.4□□□□□ -1.71
TCF4-239ENST00000568186 IBSPP21815 317 aaPredicted RBP4.4□□□□□ -1.71
TCF4-239ENST00000568186 INHBEP58166 350 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 C2orf27AQ580R0 203 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 FAM47CQ5HY64 1035 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 FAM209AQ5JX71 171 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 Q6ZUG5 572 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 NOL8Q76FK4 1167 aaKnown RBP4.4□□□□□ -1.71
TCF4-239ENST00000568186 GPR155Q7Z3F1 870 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 DTX3Q8N9I9 347 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 EXOC2Q96KP1 924 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 JAM3Q9BX67 310 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 IPPKQ9H8X2 491 aa4.4□□□□□ -1.71
TCF4-239ENST00000568186 WDR33Q9C0J8 1336 aaKnown RBP4.4□□□□□ -1.71
TCF4-239ENST00000568186 ASXL2Q76L83 1435 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 FAM221BA6H8Z2 402 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 ARVCFO00192 962 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 ENPP3O14638 875 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 FAM153BP0C7A2 387 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 CSF2RBP32927 897 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 EPHA5P54756 1037 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 SMAD2Q15796 467 aaKnown RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 NRN1LQ496H8 165 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 USP39Q53GS9 565 aaKnown RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 RNF187Q5TA31 235 aaPredicted RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 VASNQ6EMK4 673 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 KCTD1Q719H9 257 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 NLGN4XQ8N0W4 816 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 JMYQ8N9B5 988 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 ZCRB1Q8TBF4 217 aaKnown RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 KCNJ15Q99712 375 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 METTL14Q9HCE5 456 aaKnown RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 DLL4Q9NR61 685 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 SFMBT1Q9UHJ3 866 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 DSEQ9UL01 958 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 ZFR2Q9UPR6 939 aaKnown RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 NOP58Q9Y2X3 529 aaKnown RBP4.39□□□□□ -1.71
TCF4-239ENST00000568186 TRAF6Q9Y4K3 522 aa4.39□□□□□ -1.71
TCF4-239ENST00000568186 SLC27A2O14975 620 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 NARSO43776 548 aaKnown RBP4.38□□□□□ -1.71
TCF4-239ENST00000568186 KNG1P01042 644 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 ANAPC15P60006 121 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 ST5P78524 1137 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 GUCY1A3Q02108 690 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 PTH1RQ03431 593 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 TUSC3Q13454 348 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 GPR19Q15760 415 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 TRIM61Q5EBN2 209 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 FIGNQ5HY92 759 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 FOXB2Q5VYV0 432 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 IFNL2Q8IZJ0 200 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 AMER2Q8N7J2 671 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 GIMAP8Q8ND71 665 aaPredicted RBP4.38□□□□□ -1.71
TCF4-239ENST00000568186 FBXW5Q969U6 566 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 AJUBAQ96IF1 538 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 DNAJC7Q99615 494 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 MRPL4Q9BYD3 311 aaKnown RBP4.38□□□□□ -1.71
TCF4-239ENST00000568186 IKZF4Q9H2S9 585 aa4.38□□□□□ -1.71
TCF4-239ENST00000568186 ARID4BQ4LE39 1312 aaPredicted RBP4.38□□□□□ -1.71
TCF4-239ENST00000568186 CHGBP05060 677 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 FAHP16930 419 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 COMTP21964 271 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 GJA4P35212 333 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 DGCR2P98153 550 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 PURAQ00577 322 aaKnown RBP4.37□□□□□ -1.71
TCF4-239ENST00000568186 CRY1Q16526 586 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 PAN2Q504Q3 1202 aaKnown RBP4.37□□□□□ -1.71
TCF4-239ENST00000568186 EP400NLQ6ZTU2 488 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 TAX1BP1Q86VP1 789 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 GSTCDQ8NEC7 633 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 EDAQ92838 391 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 EXTL1Q92935 676 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 NEIL1Q96FI4 390 aaPredicted RBP4.37□□□□□ -1.71
TCF4-239ENST00000568186 CEP89Q96ST8 783 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 TRIM8Q9BZR9 551 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 CSRNP2Q9H175 543 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 NDOR1Q9UHB4 597 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 ZFP69BQ9UJL9 534 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 SRPK3Q9UPE1 567 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 PTCH2Q9Y6C5 1203 aa4.37□□□□□ -1.71
TCF4-239ENST00000568186 NKRFO15226 690 aaKnown RBP eCLIP4.36□□□□□ -1.71
TCF4-239ENST00000568186 FBXO21O94952 628 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 NPTXRO95502 500 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 COL6A2P12110 1019 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 GRIN1Q05586 938 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 DPTQ07507 201 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 SKIDA1Q1XH10 827 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 AGBL4Q5VU57 503 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 C16orf59Q7L2K0 433 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 ZC3H7AQ8IWR0 971 aaKnown RBP4.36□□□□□ -1.71
TCF4-239ENST00000568186 REXO1L1PQ8IX06 675 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 FUKQ8N0W3 1084 aa4.36□□□□□ -1.71
TCF4-239ENST00000568186 PCDH19Q8TAB3 1148 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms