RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 DNAJB2P25686 324 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 PBX2P40425 430 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 JAK3P52333 1124 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 PPP2R5CQ13362 524 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 INF2Q27J81 1249 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 ZNF484Q5JVG2 852 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 ZNF697Q5TEC3 545 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 SWSAP1Q6NVH7 229 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 POTEBQ6S5H4 581 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 RUFY4Q6ZNE9 571 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 Q7L0L9 218 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 LINC01465Q8N7H1 131 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 BBXQ8WY36 941 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 HAS1Q92839 578 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 CEP89Q96ST8 783 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 NAP1L4Q99733 375 aaKnown RBP9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 OSBPL7Q9BZF2 842 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 DISC1Q9NRI5 854 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 TUBE1Q9UJT0 475 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 ARID2Q68CP9 1835 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
HDGFL3-205ENST00000568129 RALGAPA2Q2PPJ7 1873 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 TRANK1O15050 2925 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 CCDC194A0A1B0GVG4 234 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 BTBD18B2RXH4 712 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 SLC37A4O43826 429 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 DTNBO60941 627 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 ATP2A2P16615 1042 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 MARK3P27448 753 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 KRT2P35908 639 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 WDR5P61964 334 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 HMGN5P82970 282 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 SPIRE1Q08AE8 756 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 NR5A1Q13285 461 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 IKBKEQ14164 716 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 TARBP2Q15633 366 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 RAB30Q15771 203 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 LRCH2Q5VUJ6 765 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 KRT40Q6A162 431 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 PDXDC2PQ6P474 469 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 MTHFD1LQ6UB35 978 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 KIAA0319LQ8IZA0 1049 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 CRIPAKQ8N1N5 446 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 ZNF710Q8N1W2 664 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 USP38Q8NB14 1042 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 DBF4BQ8NFT6 615 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 FBXO18Q8NFZ0 1043 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 APBB2Q92870 758 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 TIFAQ96CG3 184 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 TEKT3Q9BXF9 490 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 NIFKQ9BYG3 293 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 UNC45AQ9H3U1 944 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 ZNF576Q9H609 170 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 DDX25Q9UHL0 483 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 VAV3Q9UKW4 847 aa9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 YBX2Q9Y2T7 364 aaKnown RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 FNDC1Q4ZHG4 1894 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-205ENST00000568129 IGKV6-21A0A0C4DH24 114 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 DDX39AO00148 427 aaKnown RBP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 MAGEB2O15479 319 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 GAS7O60861 476 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 POU3F3P20264 500 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 KLRC1P26715 233 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 HTRA4P83105 476 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 LETM2Q2VYF4 491 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 FBXO47Q5MNV8 452 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 IER5Q5VY09 327 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 PIK3AP1Q6ZUJ8 805 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 RSPH3Q86UC2 560 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 HERC6Q8IVU3 1022 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 DNAJB3Q8WWF6 145 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 FAM167AQ96KS9 214 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 MTMR9Q96QG7 549 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 CDX2Q99626 313 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 BACH2Q9BYV9 841 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 FTOQ9C0B1 505 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 FOXP1Q9H334 677 aaPredicted RBP9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 GABBR1Q9UBS5 961 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 MSRAQ9UJ68 235 aa9.24□□□□□ -0.93
HDGFL3-205ENST00000568129 FAM205CA6NFA0 338 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 EML1O00423 815 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 BACH1O14867 736 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 ST18O60284 1047 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 GJB5O95377 273 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 CD2BP2O95400 341 aaKnown RBP9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 C22orf31O95567 290 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 U2AF2P26368 475 aaKnown RBP eCLIP9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 MCM2P49736 904 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 MRPS6P82932 125 aaKnown RBP9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 ORC2Q13416 577 aaPredicted RBP9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 LPIN1Q14693 890 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 GRIN2CQ14957 1233 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 CCDC83Q8IWF9 413 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 SLFN12Q8IYM2 578 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 TRAPPC12Q8WVT3 735 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 SEPT8Q92599 483 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 GJA10Q969M2 543 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 TOP1MTQ969P6 601 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms