RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RTP1P59025 263 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 ADAM17P78536 824 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 PTPN11Q06124 597 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-222ENST00000568034 GDF6Q6KF10 455 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-222ENST00000568034 POTEBQ6S5H4 581 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 ANKRD33Q7Z3H0 272 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 C4orf19Q8IY42 314 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 KRI1Q8N9T8 703 aaKnown RBP20.18■□□□□ 0.82
COMMD4-222ENST00000568034 SNX29Q8TEQ0 813 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 LEO1Q8WVC0 666 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-222ENST00000568034 RAB34Q9BZG1 259 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 TUFT1Q9NNX1 390 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 TMEM150BA6NC51 233 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 INSRRP14616 1297 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 LONP1P36776 959 aaKnown RBP20.17■□□□□ 0.82
COMMD4-222ENST00000568034 ZNF200P98182 395 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-222ENST00000568034 MLLT1Q03111 559 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-222ENST00000568034 AXDND1Q5T1B0 1012 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-222ENST00000568034 HAUS3Q68CZ6 603 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 C7orf31Q8N865 590 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 ERMNQ8TAM6 284 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 KCNG4Q8TDN1 519 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 LMBR1Q8WVP7 490 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 BBXQ8WY36 941 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-222ENST00000568034 FAM167AQ96KS9 214 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 AK8Q96MA6 479 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 SEZ6LQ9BYH1 1024 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 ZSWIM4Q9H7M6 989 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 SETD4Q9NVD3 440 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 TRPC6Q9Y210 931 aa20.17■□□□□ 0.82
COMMD4-222ENST00000568034 HBP1O60381 514 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 B4GALT4O60513 344 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 CD4P01730 458 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 NCLP19338 710 aaKnown RBP20.16■□□□□ 0.82
COMMD4-222ENST00000568034 TLE2Q04725 743 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 PPFIA1Q13136 1202 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 TARBP2Q15633 366 aaKnown RBP20.16■□□□□ 0.82
COMMD4-222ENST00000568034 GRIK4Q16099 956 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 XKR3Q5GH77 459 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 FAM47CQ5HY64 1035 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 HYIQ5T013 277 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 POTEGQ6S5H5 508 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 USP49Q70CQ1 688 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 ANO5Q75V66 913 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 TPH2Q8IWU9 490 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 CKAP2LQ8IYA6 745 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 TNPO1Q92973 898 aaKnown RBP20.16■□□□□ 0.82
COMMD4-222ENST00000568034 PNMA5Q96PV4 448 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 CEP89Q96ST8 783 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 TRMT13Q9NUP7 481 aaKnown RBP20.16■□□□□ 0.82
COMMD4-222ENST00000568034 DNAH12Q6ZR08 3092 aa20.16■□□□□ 0.82
COMMD4-222ENST00000568034 TRIP12Q14669 1992 aaPredicted RBP20.15■□□□□ 0.82
COMMD4-222ENST00000568034 ZBTB39O15060 712 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 PQBP1O60828 265 aaKnown RBP20.15■□□□□ 0.82
COMMD4-222ENST00000568034 CCT6AP40227 531 aaKnown RBP20.15■□□□□ 0.82
COMMD4-222ENST00000568034 SPECC1Q5M775 1068 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 MARCH8Q5T0T0 291 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 KRT79Q5XKE5 535 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 TRMT1LQ7Z2T5 733 aaKnown RBP20.15■□□□□ 0.82
COMMD4-222ENST00000568034 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 TRAPPC12Q8WVT3 735 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 TOX2Q96NM4 488 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 NIFKQ9BYG3 293 aaKnown RBP20.15■□□□□ 0.82
COMMD4-222ENST00000568034 TRPV6Q9H1D0 765 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 GDPD2Q9HCC8 539 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 PCDHA7Q9UN72 937 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 ATP11BQ9Y2G3 1177 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 STK24Q9Y6E0 443 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 NRCAMQ92823 1304 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 COL1A2P08123 1366 aa20.15■□□□□ 0.82
COMMD4-222ENST00000568034 MROH7Q68CQ1 1323 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 C17orf102A2RUQ5 167 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 MBLAC1A4D2B0 266 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-222ENST00000568034 DKC1O60832 514 aaKnown RBP eCLIP20.14■□□□□ 0.81
COMMD4-222ENST00000568034 MUTP22033 750 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 YWHABP31946 246 aaKnown RBP20.14■□□□□ 0.81
COMMD4-222ENST00000568034 GRB10Q13322 594 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 PLA2G4FQ68DD2 849 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 CABP7Q86V35 215 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 ZNF579Q8NAF0 562 aaKnown RBP20.14■□□□□ 0.81
COMMD4-222ENST00000568034 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
COMMD4-222ENST00000568034 ZBTB10Q96DT7 871 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 EPSTI1Q96J88 318 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 SPATA32Q96LK8 384 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 CCSER1Q9C0I3 900 aa20.14■□□□□ 0.81
COMMD4-222ENST00000568034 SEPT9Q9UHD8 586 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-222ENST00000568034 A0A087WWV3 80 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 TREHO43280 583 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 CUTAO60888 179 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 FAAP100Q0VG06 881 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 TMEM119Q4V9L6 283 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 ZNF484Q5JVG2 852 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 KCNK18Q7Z418 384 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 DHX38Q92620 1227 aaKnown RBP20.13■□□□□ 0.81
COMMD4-222ENST00000568034 WNT8BQ93098 351 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 SH2D3AQ9BRG2 576 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 SCAND2PQ9GZW5 306 aaPredicted RBP20.13■□□□□ 0.81
COMMD4-222ENST00000568034 NRBP2Q9NSY0 501 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 KAT6AQ92794 2004 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms