RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 MGAT3Q09327 533 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 PLCB4Q15147 1175 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 KRT25Q7Z3Z0 450 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 ALYREFQ86V81 257 aaKnown RBP12.68□□□□□ -0.38
CDH3-206ENST00000567674 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 BLIDQ8IZY5 108 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
CDH3-206ENST00000567674 WNT8BQ93098 351 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 MBOAT7Q96N66 472 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 ZBED2Q9BTP6 218 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 IFIH1Q9BYX4 1025 aaKnown RBP12.68□□□□□ -0.38
CDH3-206ENST00000567674 ZNF302Q9NR11 478 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
CDH3-206ENST00000567674 RWDD3Q9Y3V2 267 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 PPME1Q9Y570 386 aa12.68□□□□□ -0.38
CDH3-206ENST00000567674 XIRP2A4UGR9 3374 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 KAT6AQ92794 2004 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 TBX3O15119 743 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 GTPBP6O43824 516 aaPredicted RBP12.67□□□□□ -0.38
CDH3-206ENST00000567674 SORBS3O60504 671 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 DKC1O60832 514 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDH3-206ENST00000567674 CHRNA1P02708 482 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 CA3P07451 260 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 BMP1P13497 986 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 JAK3P52333 1124 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 ERVK-21P61565 698 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 SP4Q02446 784 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 TAP1Q03518 808 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 TSHZ1Q6ZSZ6 1077 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 EXOC8Q8IYI6 725 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 RSPH1Q8WYR4 309 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 LENG9Q96B70 501 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 FAM20AQ96MK3 541 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 PHF20Q9BVI0 1012 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 UPF3BQ9BZI7 483 aaKnown RBP12.67□□□□□ -0.38
CDH3-206ENST00000567674 NCOA5Q9HCD5 579 aaKnown RBP12.67□□□□□ -0.38
CDH3-206ENST00000567674 NRBP2Q9NSY0 501 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 BDP1A6H8Y1 2624 aa12.67□□□□□ -0.38
CDH3-206ENST00000567674 BACH1O14867 736 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 CCNE2O96020 404 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 MRPS6P82932 125 aaKnown RBP12.66□□□□□ -0.38
CDH3-206ENST00000567674 SCRN1Q12765 414 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 NONOQ15233 471 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDH3-206ENST00000567674 CCDC85BQ15834 202 aaPredicted RBP12.66□□□□□ -0.38
CDH3-206ENST00000567674 PRR16Q569H4 304 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 FBXO47Q5MNV8 452 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 PDXDC2PQ6P474 469 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 MTHFD1LQ6UB35 978 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 SLC5A5Q92911 643 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 NECAB3Q96P71 396 aaPredicted RBP12.66□□□□□ -0.38
CDH3-206ENST00000567674 TGS1Q96RS0 853 aaKnown RBP12.66□□□□□ -0.38
CDH3-206ENST00000567674 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 VPS54Q9P1Q0 977 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
CDH3-206ENST00000567674 TET1Q8NFU7 2136 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 RB1P06400 928 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 KLRC1P26715 233 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 TMOD1P28289 359 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 RABGGTBP53611 331 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 SWSAP1Q6NVH7 229 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 B3GNT9Q6UX72 402 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 PPP1R13LQ8WUF5 828 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 DNAJB3Q8WWF6 145 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 CELF4Q9BZC1 486 aaKnown RBP12.65□□□□□ -0.38
CDH3-206ENST00000567674 BRMS1Q9HCU9 246 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 COG5Q9UP83 839 aa12.65□□□□□ -0.38
CDH3-206ENST00000567674 IGSF9BQ9UPX0 1349 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 MSH4O15457 936 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 GAS7O60861 476 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 GPR37L1O60883 481 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 PSMD10O75832 226 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 IGFBP4P22692 258 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 MARK3P27448 753 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 LPIN1Q14693 890 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 NPY5RQ15761 445 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 CCDC60Q8IWA6 550 aaPredicted RBP12.64□□□□□ -0.39
CDH3-206ENST00000567674 JPH2Q9BR39 696 aaPredicted RBP12.64□□□□□ -0.39
CDH3-206ENST00000567674 LLPHQ9BRT6 129 aaKnown RBP12.64□□□□□ -0.39
CDH3-206ENST00000567674 TEKT3Q9BXF9 490 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 EPHX3Q9H6B9 360 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 DISC1Q9NRI5 854 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 TPCN1Q9ULQ1 816 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 TELO2Q9Y4R8 837 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 TRPV2Q9Y5S1 764 aa12.64□□□□□ -0.39
CDH3-206ENST00000567674 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.63□□□□□ -0.39
CDH3-206ENST00000567674 C5orf67F2Z3F1 127 aa12.63□□□□□ -0.39
CDH3-206ENST00000567674 ENPP3O14638 875 aa12.63□□□□□ -0.39
CDH3-206ENST00000567674 GPR182O15218 404 aa12.63□□□□□ -0.39
CDH3-206ENST00000567674 EDIL3O43854 480 aa12.63□□□□□ -0.39
CDH3-206ENST00000567674 STAG3L1P0CL83 205 aa12.63□□□□□ -0.39
CDH3-206ENST00000567674 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
CDH3-206ENST00000567674 AK2P54819 239 aa12.63□□□□□ -0.39
CDH3-206ENST00000567674 DEFB103AP81534 67 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms