RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 PCDH10Q9P2E7 1040 aa17.01■□□□□ 0.31
COMMD4-219ENST00000567399 IGSF9BQ9UPX0 1349 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 POTEMA6NI47 508 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 BMP15O95972 392 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 ATP4AP20648 1035 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
COMMD4-219ENST00000567399 CYP4A11Q02928 519 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 FPGSQ05932 587 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 RESTQ13127 1097 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 CTTNQ14247 550 aaKnown RBP17■□□□□ 0.31
COMMD4-219ENST00000567399 HIC1Q14526 733 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 UGCGQ16739 394 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 XKR3Q5GH77 459 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 CHRDL2Q6WN34 429 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 CCDC43Q96MW1 224 aaKnown RBP17■□□□□ 0.31
COMMD4-219ENST00000567399 EIF2AK1Q9BQI3 630 aaKnown RBP17■□□□□ 0.31
COMMD4-219ENST00000567399 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 RGL1Q9NZL6 768 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 COL1A2P08123 1366 aa17■□□□□ 0.31
COMMD4-219ENST00000567399 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-219ENST00000567399 ITGB8P26012 769 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 KLRC1P26715 233 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 CEBPZQ03701 1054 aaKnown RBP16.99■□□□□ 0.31
COMMD4-219ENST00000567399 PPIGQ13427 754 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■■■ 27.3
COMMD4-219ENST00000567399 SF3A1Q15459 793 aaKnown RBP16.99■□□□□ 0.31
COMMD4-219ENST00000567399 TAF2Q6P1X5 1199 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 OTUD6AQ7L8S5 288 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 SERINC5Q86VE9 423 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 METTL13Q8N6R0 699 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 C4orf32Q8N8J7 132 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-219ENST00000567399 LXNQ9BS40 222 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 FAM49AQ9H0Q0 323 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-219ENST00000567399 LRWD1Q9UFC0 647 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 STK24Q9Y6E0 443 aa16.99■□□□□ 0.31
COMMD4-219ENST00000567399 UMODL1Q5DID0 1318 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 ZNF862O60290 1169 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 CKBP12277 381 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 CSF2RAP15509 400 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 SELPP16109 830 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 PRPHP41219 470 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
COMMD4-219ENST00000567399 ATP2C1P98194 919 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-219ENST00000567399 SPIRE1Q08AE8 756 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-219ENST00000567399 MTERF2Q49AM1 385 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 HAUS3Q68CZ6 603 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 FAM173BQ6P4H8 233 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 MTHFD1LQ6UB35 978 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-219ENST00000567399 LRRC8DQ7L1W4 858 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 RPUSD2Q8IZ73 545 aaKnown RBP16.98■□□□□ 0.31
COMMD4-219ENST00000567399 SCLYQ96I15 445 aa16.98■□□□□ 0.31
COMMD4-219ENST00000567399 VWA3AA6NCI4 1184 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 RSPH10B2B2RC85 870 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 M0QZ92 97 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 MAGEB2O15479 319 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 SLITRK3O94933 977 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 RPLP2P05387 115 aaKnown RBP16.97■□□□□ 0.31
COMMD4-219ENST00000567399 IQCF3P0C7M6 154 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 RSPH10BP0C881 870 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 TMOD1P28289 359 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 HOXC8P31273 242 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 CCT6AP40227 531 aaKnown RBP16.97■□□□□ 0.31
COMMD4-219ENST00000567399 TBC1D8BQ0IIM8 1120 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 PDIA5Q14554 519 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 MARCH8Q5T0T0 291 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 ZNF618Q5T7W0 954 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 RUFY4Q6ZNE9 571 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 DEFB128Q7Z7B8 93 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 C4orf19Q8IY42 314 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 DNAJB3Q8WWF6 145 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 DHX38Q92620 1227 aaKnown RBP16.97■□□□□ 0.31
COMMD4-219ENST00000567399 ZBTB10Q96DT7 871 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 CEP170P1Q96L14 293 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 FTOQ9C0B1 505 aaKnown RBP eCLIP16.97■□□□□ 0.31
COMMD4-219ENST00000567399 SUGCTQ9HAC7 445 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 PCDHA2Q9Y5H9 948 aa16.97■□□□□ 0.31
COMMD4-219ENST00000567399 F13A1P00488 732 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 CTSHP09668 335 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 YWHABP31946 246 aaKnown RBP16.96■□□□□ 0.31
COMMD4-219ENST00000567399 RFC2P35250 354 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 ADAM17P78536 824 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.31
COMMD4-219ENST00000567399 XKR9Q5GH70 373 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 KRT79Q5XKE5 535 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 ARL6IP4Q66PJ3 421 aaKnown RBP16.96■□□□□ 0.31
COMMD4-219ENST00000567399 CTAGE1Q96RT6 745 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 GDF15Q99988 308 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 NIFKQ9BYG3 293 aaKnown RBP16.96■□□□□ 0.31
COMMD4-219ENST00000567399 WNT8AQ9H1J5 351 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 CLIC4Q9Y696 253 aa16.96■□□□□ 0.31
COMMD4-219ENST00000567399 SMIM35A0A1B0GVV1 85 aa16.95■□□□□ 0.3
COMMD4-219ENST00000567399 MBLAC1A4D2B0 266 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-219ENST00000567399 TMEM150BA6NC51 233 aa16.95■□□□□ 0.3
COMMD4-219ENST00000567399 CAND2O75155 1236 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms