RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PTGS1P23219 599 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 SUMO1P63165 101 aaKnown RBP5.21□□□□□ -1.58
CDH1-211ENST00000567320 RNF151Q2KHN1 245 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 FAM47CQ5HY64 1035 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 FAM209AQ5JX71 171 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 INCENPQ9NQS7 918 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 CDC42EP3Q9UKI2 254 aa5.21□□□□□ -1.58
CDH1-211ENST00000567320 MAN2B1O00754 1011 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 NAT1P18440 290 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 ACO1P21399 889 aaKnown RBP5.2□□□□□ -1.58
CDH1-211ENST00000567320 GJA4P35212 333 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 KLF10Q13118 480 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 FOXE3Q13461 319 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 TOP3AQ13472 1001 aaPredicted RBP5.2□□□□□ -1.58
CDH1-211ENST00000567320 FIGNQ5HY92 759 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 AGBL4Q5VU57 503 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 RNF207Q6ZRF8 634 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 PCDH19Q8TAB3 1148 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 ZNF669Q96BR6 464 aaPredicted RBP5.2□□□□□ -1.58
CDH1-211ENST00000567320 SCYL1Q96KG9 808 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 KIAA1683Q9H0B3 1180 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 PUF60Q9UHX1 559 aaKnown RBP5.2□□□□□ -1.58
CDH1-211ENST00000567320 PCDHA9Q9Y5H5 950 aa5.2□□□□□ -1.58
CDH1-211ENST00000567320 CCDC66A2RUB6 948 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 RAD17O75943 681 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 MC4RP32245 332 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 ETV4P43268 484 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 MEOX1P50221 254 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 JAM2P57087 298 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 IL13RA1P78552 427 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 C16orf59Q7L2K0 433 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 RTKN2Q8IZC4 609 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 EXTL1Q92935 676 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 FAM89AQ96GI7 184 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 MENTQ9BUN1 341 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 PCED1AQ9H1Q7 454 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 UCKL1Q9NWZ5 548 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 GALNT8Q9NY28 637 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 ING1Q9UK53 422 aaPredicted RBP5.19□□□□□ -1.58
CDH1-211ENST00000567320 FAM184BQ9ULE4 1060 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 CBLCQ9ULV8 474 aa5.19□□□□□ -1.58
CDH1-211ENST00000567320 AMY2AP04746 511 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 AMY2BP19961 511 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 GABREP78334 506 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 FHL2Q14192 279 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 POLNQ7Z5Q5 900 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 FILIP1Q7Z7B0 1213 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 C1orf210Q8IVY1 113 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 CISD2Q8N5K1 135 aaKnown RBP5.18□□□□□ -1.58
CDH1-211ENST00000567320 ZBTB38Q8NAP3 1195 aaPredicted RBP5.18□□□□□ -1.58
CDH1-211ENST00000567320 EDAQ92838 391 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 PLA2G12BQ9BX93 195 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 ZDHHC5Q9C0B5 715 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 SLITRK6Q9H5Y7 841 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 FBXO10Q9UK96 956 aa5.18□□□□□ -1.58
CDH1-211ENST00000567320 OVOL3O00110 214 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 SCDO00767 359 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 ADCY3O60266 1144 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 ZNF202O95125 648 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 CRTAMO95727 393 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 HHEXQ03014 270 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 ABHD18Q0P651 414 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 RASGRF1Q13972 1273 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 FOXB2Q5VYV0 432 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 USP30Q70CQ3 517 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 CXXC5Q7LFL8 322 aaKnown RBP5.17□□□□□ -1.58
CDH1-211ENST00000567320 HIPK4Q8NE63 616 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 NDOR1Q9UHB4 597 aa5.17□□□□□ -1.58
CDH1-211ENST00000567320 ARVCFO00192 962 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 DIAPH1O60610 1272 aaKnown RBP5.16□□□□□ -1.58
CDH1-211ENST00000567320 C4BPAP04003 597 aaKnown RBP5.16□□□□□ -1.58
CDH1-211ENST00000567320 FAM153BP0C7A2 387 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 ATP2B1P20020 1258 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 AOAHP28039 575 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 MSX2P35548 267 aaPredicted RBP5.16□□□□□ -1.58
CDH1-211ENST00000567320 RPS19P39019 145 aaKnown RBP5.16□□□□□ -1.58
CDH1-211ENST00000567320 ECE1P42892 770 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 TGFB2P61812 414 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 CD83Q01151 205 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 PTH1RQ03431 593 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 LSM12Q3MHD2 195 aaKnown RBP5.16□□□□□ -1.58
CDH1-211ENST00000567320 CRB2Q5IJ48 1285 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 LRSAM1Q6UWE0 723 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 OR14K1Q8NGZ2 314 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 PLEKHG4BQ96PX9 1271 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 DHRS4Q9BTZ2 278 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 MSRB2Q9Y3D2 182 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 KDM2BQ8NHM5 1336 aa5.16□□□□□ -1.58
CDH1-211ENST00000567320 A0A0G2JNJ9 132 aa5.15□□□□□ -1.59
CDH1-211ENST00000567320 PRAMEF22A3QJZ6 481 aa5.15□□□□□ -1.59
CDH1-211ENST00000567320 ZNF561-AS1K7EIQ3 104 aa5.15□□□□□ -1.59
CDH1-211ENST00000567320 WNT9AO14904 365 aa5.15□□□□□ -1.59
CDH1-211ENST00000567320 CLASP2O75122 1294 aaKnown RBP5.15□□□□□ -1.59
CDH1-211ENST00000567320 MMEP08473 750 aa5.15□□□□□ -1.59
CDH1-211ENST00000567320 C6orf222P0C671 652 aaPredicted RBP5.15□□□□□ -1.59
CDH1-211ENST00000567320 HIBADHP31937 336 aaKnown RBP5.15□□□□□ -1.59
CDH1-211ENST00000567320 MRE11P49959 708 aa5.15□□□□□ -1.59
CDH1-211ENST00000567320 HERVK_113P62684 666 aa5.15□□□□□ -1.59
CDH1-211ENST00000567320 DGCR2P98153 550 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms