RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 KRT17Q04695 432 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 CSTF1Q05048 431 aaKnown RBP11.33□□□□□ -0.6
CAPN3-216ENST00000567071 TAF2Q6P1X5 1199 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 RASGRP2Q7LDG7 609 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 COLGALT1Q8NBJ5 622 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 C16orf70Q9BSU1 422 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 BCO2Q9BYV7 579 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 MAF1Q9H063 256 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 SETD4Q9NVD3 440 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 PAG1Q9NWQ8 432 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 ZSCAN32Q9NX65 697 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 DLGAP2Q9P1A6 1054 aa11.33□□□□□ -0.6
CAPN3-216ENST00000567071 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
CAPN3-216ENST00000567071 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.33□□□□□ -0.6
CAPN3-216ENST00000567071 DENND4AQ7Z401 1863 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 NOP56O00567 594 aaKnown RBP11.32□□□□□ -0.6
CAPN3-216ENST00000567071 NARSO43776 548 aaKnown RBP11.32□□□□□ -0.6
CAPN3-216ENST00000567071 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-216ENST00000567071 LRP3O75074 770 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 GGPS1O95749 300 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 PPM1AP35813 382 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 TFAP4Q01664 338 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 SPEM2Q0P670 501 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 SMC1AQ14683 1233 aaKnown RBP11.32□□□□□ -0.6
CAPN3-216ENST00000567071 UBE3CQ15386 1083 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 HSDL1Q3SXM5 330 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 FBXO47Q5MNV8 452 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 CELF3Q5SZQ8 465 aaKnown RBP11.32□□□□□ -0.6
CAPN3-216ENST00000567071 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-216ENST00000567071 ARHGEF16Q5VV41 709 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 MYSM1Q5VVJ2 828 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 SHDQ96IW2 340 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 RMDN3Q96TC7 470 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 MLXIPQ9HAP2 919 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 PARD6AQ9NPB6 346 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 ZNF215Q9UL58 517 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-216ENST00000567071 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
CAPN3-216ENST00000567071 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 POTEMA6NI47 508 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 SORBS3O60504 671 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 ZIC2O95409 532 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-216ENST00000567071 LGALS2P05162 132 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 SRFP11831 508 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 TGM1P22735 817 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 PLCB3Q01970 1234 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 SLFNL1Q499Z3 407 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 BTNL9Q6UXG8 535 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 KDF1Q8NAX2 398 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-216ENST00000567071 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 IGSF5Q9NSI5 407 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 NBEAQ8NFP9 2946 aa11.31□□□□□ -0.6
CAPN3-216ENST00000567071 FNDC1Q4ZHG4 1894 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-216ENST00000567071 C1QTNF9BB2RNN3 333 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 M0QZ92 97 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 RPLP2P05387 115 aaKnown RBP11.3□□□□□ -0.6
CAPN3-216ENST00000567071 C1QTNF9P0C862 333 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 CD52P31358 61 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 GATMP50440 423 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 RING1Q06587 406 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 LAIR1Q6GTX8 287 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 DCLRE1AQ6PJP8 1040 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 CABP7Q86V35 215 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-216ENST00000567071 C12orf76Q8N812 135 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-216ENST00000567071 ZBTB44Q8NCP5 570 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 LINC01599Q8WXQ3 324 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 KIF12Q96FN5 646 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 NRCAMQ92823 1304 aa11.3□□□□□ -0.6
CAPN3-216ENST00000567071 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 APPP05067 770 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
CAPN3-216ENST00000567071 MAGEA9P43362 315 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 MGAT3Q09327 533 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 PAK2Q13177 524 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 USH1GQ495M9 461 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 TTBK2Q6IQ55 1244 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 TMC5Q6UXY8 1006 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 MCF2L2Q86YR7 1114 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 LMBR1Q8WVP7 490 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 GLG1Q92896 1179 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 NXPE3Q969Y0 559 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 PUS7LQ9H0K6 701 aaKnown RBP11.29□□□□□ -0.6
CAPN3-216ENST00000567071 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
CAPN3-216ENST00000567071 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 ANKFY1Q9P2R3 1169 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
CAPN3-216ENST00000567071 SQORQ9Y6N5 450 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms