RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TMEM260Q9NX78 707 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 A0A0A6YYK5 440 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 PHF20L1A8MW92 1017 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 KRIT1O00522 736 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 PPFIA2O75334 1257 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 EZRP15311 586 aaKnown RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 POU5F1Q01860 360 aaKnown RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 SLC4A8Q2Y0W8 1093 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 CHMP6Q96FZ7 201 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 POTEMA6NI47 508 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 RASA1P20936 1047 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 PRKCIP41743 596 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 ECM1Q16610 540 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 KRT71Q3SY84 523 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 SMIM5Q71RC9 77 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 CPLX4Q7Z7G2 160 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-215ENST00000566843 KCTD10Q9H3F6 313 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 TTC7AQ9ULT0 858 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-215ENST00000566843 MTMR7Q9Y216 660 aa17.11■□□□□ 0.33
COMMD4-215ENST00000566843 CCT8L1PA6NM43 557 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 GSTA1P08263 222 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 ITGA4P13612 1032 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 HYIQ5T013 277 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 CEP57Q86XR8 500 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
COMMD4-215ENST00000566843 AMACRQ9UHK6 382 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-215ENST00000566843 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 BACH1O14867 736 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 TDP2O95551 362 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 NPEPPSP55786 919 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 ELF3P78545 371 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-215ENST00000566843 DHX9Q08211 1270 aaKnown RBP17.1■□□□□ 0.33
COMMD4-215ENST00000566843 CRYMQ14894 314 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-215ENST00000566843 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-215ENST00000566843 ZNF317Q96PQ6 595 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-215ENST00000566843 PIGSQ96S52 555 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 FGFBP2Q9BYJ0 223 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 GOLPH3Q9H4A6 298 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 INTUQ9ULD6 942 aa17.1■□□□□ 0.33
COMMD4-215ENST00000566843 SBF2Q86WG5 1849 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 TTI1O43156 1089 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 KCNH2Q12809 1159 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 ENOX2Q16206 610 aaKnown RBP17.09■□□□□ 0.33
COMMD4-215ENST00000566843 ALKBH5Q6P6C2 394 aaKnown RBP17.09■□□□□ 0.33
COMMD4-215ENST00000566843 CCDC197Q8NCU1 140 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
COMMD4-215ENST00000566843 SCLT1Q96NL6 688 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 LRRC4CQ9HCJ2 640 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 ASAP2O43150 1006 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
COMMD4-215ENST00000566843 SCP2P22307 547 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 ITIH4Q14624 930 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 EDRF1Q3B7T1 1238 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 PEX26Q7Z412 305 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 PIGWQ7Z7B1 504 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 SLC44A5Q8NCS7 719 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 BANK1Q8NDB2 785 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 ATP8B4Q8TF62 1192 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 HES6Q96HZ4 224 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 RIOX1Q9H6W3 641 aa17.09■□□□□ 0.33
COMMD4-215ENST00000566843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■□□□ 14.4
COMMD4-215ENST00000566843 SNED1Q8TER0 1413 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 OPLAHO14841 1288 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 ATP6V1G2O95670 118 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 NUDT17P0C025 328 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 NT5DC3Q86UY8 548 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.33
COMMD4-215ENST00000566843 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 SYCE1Q8N0S2 351 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.33
COMMD4-215ENST00000566843 SCFD1Q8WVM8 642 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 TFCP2L1Q9NZI6 479 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 SLC12A4Q9UP95 1085 aa17.08■□□□□ 0.33
COMMD4-215ENST00000566843 UTP11Q9Y3A2 253 aaKnown RBP17.08■□□□□ 0.33
COMMD4-215ENST00000566843 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
COMMD4-215ENST00000566843 UCHL3P15374 230 aa17.08■□□□□ 0.32
COMMD4-215ENST00000566843 RIPK1Q13546 671 aa17.08■□□□□ 0.32
COMMD4-215ENST00000566843 USP17L2Q6R6M4 530 aa17.08■□□□□ 0.32
COMMD4-215ENST00000566843 HOOK3Q86VS8 718 aa17.08■□□□□ 0.32
COMMD4-215ENST00000566843 EPB41L4BQ9H329 900 aa17.08■□□□□ 0.32
COMMD4-215ENST00000566843 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-215ENST00000566843 FLOT1O75955 427 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 ACTN1P12814 892 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 PPP4CP60510 307 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 PPARDQ03181 441 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 ADAM9Q13443 819 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms