RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 B4E1Z4 1266 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 M0QZ92 97 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 FSCN2O14926 492 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 FGF18O76093 207 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 MFAP1P55081 439 aaKnown RBP19.41■□□□□ 0.7
CDH3-205ENST00000566808 NMIQ13287 307 aaPredicted RBP19.41■□□□□ 0.7
CDH3-205ENST00000566808 MARCH8Q5T0T0 291 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 SPOUT1Q5T280 376 aaKnown RBP19.41■□□□□ 0.7
CDH3-205ENST00000566808 SYCE2Q6PIF2 218 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 HOMER1Q86YM7 354 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 PADI3Q9ULW8 664 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 TRPV2Q9Y5S1 764 aa19.41■□□□□ 0.7
CDH3-205ENST00000566808 MARK3P27448 753 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 SARSP49591 514 aaKnown RBP19.4■□□□□ 0.7
CDH3-205ENST00000566808 CLCN5P51795 746 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 ERVFC1P60507 584 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 FAM43BQ6ZT52 329 aaPredicted RBP19.4■□□□□ 0.7
CDH3-205ENST00000566808 THNSL1Q8IYQ7 743 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 NECTIN4Q96NY8 510 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 UBAC1Q9BSL1 405 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 FAM49AQ9H0Q0 323 aaPredicted RBP19.4■□□□□ 0.7
CDH3-205ENST00000566808 MFSD1Q9H3U5 465 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 RCAN3Q9UKA8 241 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 LZTS1Q9Y250 596 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 OTOGLQ3ZCN5 2332 aa19.4■□□□□ 0.7
CDH3-205ENST00000566808 IFIT1BQ5T764 474 aaKnown RBP19.39■□□□□ 0.69
CDH3-205ENST00000566808 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
CDH3-205ENST00000566808 TMEM260Q9NX78 707 aa19.39■□□□□ 0.69
CDH3-205ENST00000566808 RTEL1Q9NZ71 1219 aa19.39■□□□□ 0.69
CDH3-205ENST00000566808 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
CDH3-205ENST00000566808 DENND4AQ7Z401 1863 aa19.39■□□□□ 0.69
CDH3-205ENST00000566808 C2CD4DB7Z1M9 353 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 TPRNQ4KMQ1 711 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 PLPP4Q5VZY2 271 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 PCNX4Q63HM2 1172 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 XRRA1Q6P2D8 792 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 COLGALT1Q8NBJ5 622 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 APOL5Q9BWW9 433 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 ZSWIM5Q9P217 1185 aa19.38■□□□□ 0.69
CDH3-205ENST00000566808 KDM3AQ9Y4C1 1321 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 PALM3A6NDB9 673 aaPredicted RBP19.37■□□□□ 0.69
CDH3-205ENST00000566808 RRN3P2A6NIE6 340 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 IGBP1P78318 339 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 CES5AQ6NT32 575 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 LLGL2Q6P1M3 1020 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 NLRX1Q86UT6 975 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 GLG1Q92896 1179 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 TCF25Q9BQ70 676 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 TMX1Q9H3N1 280 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 SMARCAD1Q9H4L7 1026 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 POMKQ9H5K3 350 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 ENTPD7Q9NQZ7 604 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
CDH3-205ENST00000566808 PCDHB7Q9Y5E2 793 aa19.37■□□□□ 0.69
CDH3-205ENST00000566808 MED19A0JLT2 244 aaPredicted RBP19.36■□□□□ 0.69
CDH3-205ENST00000566808 TBKBP1A7MCY6 615 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 LAG3P18627 525 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 PDE1AP54750 535 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 ITIH3Q06033 890 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 SEPT1Q8WYJ6 367 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 CASP10Q92851 521 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 CDHR1Q96JP9 859 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 PIGSQ96S52 555 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 KRT23Q9C075 422 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 SMOC2Q9H3U7 446 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 RIOX1Q9H6W3 641 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 CNNM2Q9H8M5 875 aa19.36■□□□□ 0.69
CDH3-205ENST00000566808 NGRNQ9NPE2 291 aaKnown RBP19.36■□□□□ 0.69
CDH3-205ENST00000566808 KCNA2P16389 499 aa19.35■□□□□ 0.69
CDH3-205ENST00000566808 IBSPP21815 317 aaPredicted RBP19.35■□□□□ 0.69
CDH3-205ENST00000566808 PLCB3Q01970 1234 aa19.35■□□□□ 0.69
CDH3-205ENST00000566808 TMEM62Q0P6H9 643 aa19.35■□□□□ 0.69
CDH3-205ENST00000566808 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
CDH3-205ENST00000566808 CWF19L1Q69YN2 538 aaKnown RBP19.35■□□□□ 0.69
CDH3-205ENST00000566808 TDRD5Q8NAT2 981 aaKnown RBP19.35■□□□□ 0.69
CDH3-205ENST00000566808 MRPS27Q92552 414 aaKnown RBP19.35■□□□□ 0.69
CDH3-205ENST00000566808 GPRASP2Q96D09 838 aa19.35■□□□□ 0.69
CDH3-205ENST00000566808 CELF4Q9BZC1 486 aaKnown RBP19.35■□□□□ 0.69
CDH3-205ENST00000566808 C1orf112Q9NSG2 853 aa19.35■□□□□ 0.69
CDH3-205ENST00000566808 PUF60Q9UHX1 559 aaKnown RBP19.35■□□□□ 0.69
CDH3-205ENST00000566808 SPTBN2O15020 2390 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 PNMA6FA0A0J9YX94 578 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 GSTTP1A0A1W2PQM5 241 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 INSRRP14616 1297 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 MTHFRP42898 656 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 APOBRQ0VD83 1088 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 DGLUCYQ7Z3D6 616 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 ZDHHC14Q8IZN3 488 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 RMDN1Q96DB5 314 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 ZBTB10Q96DT7 871 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 ADAM7Q9H2U9 754 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 HCSTQ9UBK5 93 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 CDH22Q9UJ99 828 aa19.34■□□□□ 0.69
CDH3-205ENST00000566808 HIDE1A8MVS5 230 aa19.33■□□□□ 0.68
CDH3-205ENST00000566808 ASGR2P07307 311 aa19.33■□□□□ 0.68
CDH3-205ENST00000566808 AOC1P19801 751 aa19.33■□□□□ 0.68
CDH3-205ENST00000566808 PPM1AP35813 382 aa19.33■□□□□ 0.68
CDH3-205ENST00000566808 GRM4Q14833 912 aa19.33■□□□□ 0.68
CDH3-205ENST00000566808 SEC23AQ15436 765 aa19.33■□□□□ 0.68
CDH3-205ENST00000566808 IMMTQ16891 758 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms