RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 KIAA1671Q9BY89 1806 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 PRR33A8MZF0 331 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 ZBTB43O43298 467 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 DGKIO75912 1065 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 TMEM62Q0P6H9 643 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 CMTR2Q8IYT2 770 aaKnown RBP18.84■□□□□ 0.61
TSR3-202ENST00000566296 LINC01599Q8WXQ3 324 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 ZBTB10Q96DT7 871 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 GLT8D2Q9H1C3 349 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 MUC6Q6W4X9 2439 aa18.84■□□□□ 0.61
TSR3-202ENST00000566296 IGSF9BQ9UPX0 1349 aa18.83■□□□□ 0.61
TSR3-202ENST00000566296 POTEB3A0JP26 581 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 GOLGA8AA7E2F4 631 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 GOLGA8BA8MQT2 603 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 ZNF76P36508 570 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 SLC26A2P50443 739 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 ZP2Q05996 745 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 CSPP1Q1MSJ5 1256 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 FAM160B1Q5W0V3 765 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 TYW1BQ6NUM6 668 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 POTEBQ6S5H4 581 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 CYP2W1Q8TAV3 490 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 TRAPPC12Q8WVT3 735 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 AGO4Q9HCK5 861 aaKnown RBP18.83■□□□□ 0.6
TSR3-202ENST00000566296 LRFN2Q9ULH4 789 aa18.83■□□□□ 0.6
TSR3-202ENST00000566296 MRPL42Q9Y6G3 142 aaKnown RBP18.83■□□□□ 0.6
TSR3-202ENST00000566296 KDM3AQ9Y4C1 1321 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 SMIM35A0A1B0GVV1 85 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 DDX39AO00148 427 aaKnown RBP18.82■□□□□ 0.6
TSR3-202ENST00000566296 BACH1O14867 736 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 DCXO43602 365 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 ARP10275 920 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 SCG2P13521 617 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 SREBF1P36956 1147 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 KRT76Q01546 638 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 HYAL1Q12794 435 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 ITGB3BPQ13352 177 aaPredicted RBP18.82■□□□□ 0.6
TSR3-202ENST00000566296 NAALADL2Q58DX5 795 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 NME8Q8N427 588 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 P2RX5Q93086 422 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 TCEANC2Q96MN5 208 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
TSR3-202ENST00000566296 CELF4Q9BZC1 486 aaKnown RBP18.82■□□□□ 0.6
TSR3-202ENST00000566296 PADI3Q9ULW8 664 aa18.82■□□□□ 0.6
TSR3-202ENST00000566296 SMCO2A6NFE2 343 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 STXBP3O00186 592 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 CLUL1Q15846 466 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 CTC1Q2NKJ3 1217 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 PAN2Q504Q3 1202 aaKnown RBP18.81■□□□□ 0.6
TSR3-202ENST00000566296 BMP2KLQ5H9B9 411 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
TSR3-202ENST00000566296 ADHFE1Q8IWW8 467 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 ALG13Q9NP73 1137 aaKnown RBP18.81■□□□□ 0.6
TSR3-202ENST00000566296 BARHL2Q9NY43 387 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
TSR3-202ENST00000566296 V9GY48 417 aaPredicted RBP18.81■□□□□ 0.6
TSR3-202ENST00000566296 KLF18A0A0U1RQI7 1052 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 MEIS1O00470 390 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 HBP1O60381 514 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 IBSPP21815 317 aaPredicted RBP18.8■□□□□ 0.6
TSR3-202ENST00000566296 LTBRP36941 435 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 SMAD4Q13485 552 aaKnown RBP18.8■□□□□ 0.6
TSR3-202ENST00000566296 KRT32Q14532 448 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 ODR4Q5SWX8 454 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 MTHFD1LQ6UB35 978 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 NIPA1Q7RTP0 329 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 UIMC1Q96RL1 719 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 UPF3BQ9BZI7 483 aaKnown RBP18.8■□□□□ 0.6
TSR3-202ENST00000566296 IGFLR1Q9H665 355 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 TMEM260Q9NX78 707 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 TCEAL9Q9UHQ7 104 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
TSR3-202ENST00000566296 GINS2Q9Y248 185 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 MYH9P35579 1960 aaKnown RBP18.8■□□□□ 0.6
TSR3-202ENST00000566296 COL1A2P08123 1366 aa18.8■□□□□ 0.6
TSR3-202ENST00000566296 EVPLQ92817 2033 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 MBTPS2O43462 519 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 TBX10O75333 385 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 ATG7O95352 703 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
TSR3-202ENST00000566296 NDUFV1P49821 464 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 RCAN1P53805 252 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 FGD1P98174 961 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 FUT2Q10981 343 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
TSR3-202ENST00000566296 SMAD2Q15796 467 aaKnown RBP18.79■□□□□ 0.6
TSR3-202ENST00000566296 MIS18BP1Q6P0N0 1132 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 PDXDC2PQ6P474 469 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 FAM43BQ6ZT52 329 aaPredicted RBP18.79■□□□□ 0.6
TSR3-202ENST00000566296 RTN4RL1Q86UN2 441 aaPredicted RBP18.79■□□□□ 0.6
TSR3-202ENST00000566296 PLA2G4DQ86XP0 818 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 ATP8B4Q8TF62 1192 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 ZNF302Q9NR11 478 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 RNF216Q9NWF9 866 aaPredicted RBP18.79■□□□□ 0.6
TSR3-202ENST00000566296 CD207Q9UJ71 328 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 BRPF3Q9ULD4 1205 aa18.79■□□□□ 0.6
TSR3-202ENST00000566296 IGKV6D-21A0A0A0MT36 114 aa18.78■□□□□ 0.6
TSR3-202ENST00000566296 C19orf67A6NJJ6 358 aa18.78■□□□□ 0.6
TSR3-202ENST00000566296 RPS6KA5O75582 802 aa18.78■□□□□ 0.6
TSR3-202ENST00000566296 ITGB1P05556 798 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms